Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PTPN18Q99952 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PTPN18Q99952 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
PTPN18Q99952 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PTPN18Q99952 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PTPN18Q99952 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PTPN18Q99952 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.2■■□□□ 1.78
PTPN18Q99952 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTPN18Q99952 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
PTPN18Q99952 AC010525.1-201ENST00000585559 441 ntBASIC26.2■■□□□ 1.78
PTPN18Q99952 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTPN18Q99952 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.2■■□□□ 1.78
PTPN18Q99952 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTPN18Q99952 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.19■■□□□ 1.78
PTPN18Q99952 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTPN18Q99952 AC133637.1-201ENST00000624115 1537 ntBASIC26.19■■□□□ 1.78
PTPN18Q99952 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
PTPN18Q99952 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PTPN18Q99952 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.18■■□□□ 1.78
PTPN18Q99952 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PTPN18Q99952 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTPN18Q99952 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTPN18Q99952 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTPN18Q99952 AC006015.1-201ENST00000429970 570 ntBASIC26.18■■□□□ 1.78
PTPN18Q99952 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.18■■□□□ 1.78
PTPN18Q99952 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.18■■□□□ 1.78
PTPN18Q99952 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PTPN18Q99952 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.18■■□□□ 1.78
PTPN18Q99952 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.17■■□□□ 1.78
PTPN18Q99952 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
PTPN18Q99952 CDCA4P2-201ENST00000441182 718 ntBASIC26.17■■□□□ 1.78
PTPN18Q99952 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.17■■□□□ 1.78
PTPN18Q99952 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PTPN18Q99952 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN18Q99952 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN18Q99952 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN18Q99952 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.16■■□□□ 1.78
PTPN18Q99952 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.16■■□□□ 1.78
PTPN18Q99952 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.16■■□□□ 1.78
PTPN18Q99952 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN18Q99952 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.16■■□□□ 1.78
PTPN18Q99952 AC091060.1-201ENST00000623524 1766 ntBASIC26.15■■□□□ 1.78
PTPN18Q99952 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.15■■□□□ 1.78
PTPN18Q99952 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTPN18Q99952 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTPN18Q99952 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.15■■□□□ 1.78
PTPN18Q99952 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.15■■□□□ 1.78
PTPN18Q99952 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.15■■□□□ 1.78
PTPN18Q99952 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
PTPN18Q99952 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.15■■□□□ 1.78
PTPN18Q99952 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.15■■□□□ 1.78
PTPN18Q99952 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.15■■□□□ 1.78
PTPN18Q99952 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.14■■□□□ 1.78
PTPN18Q99952 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PTPN18Q99952 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
PTPN18Q99952 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
PTPN18Q99952 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTPN18Q99952 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.14■■□□□ 1.78
PTPN18Q99952 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTPN18Q99952 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
PTPN18Q99952 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PTPN18Q99952 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN18Q99952 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.13■■□□□ 1.77
PTPN18Q99952 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN18Q99952 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PTPN18Q99952 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.13■■□□□ 1.77
PTPN18Q99952 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.13■■□□□ 1.77
PTPN18Q99952 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.13■■□□□ 1.77
PTPN18Q99952 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.13■■□□□ 1.77
PTPN18Q99952 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN18Q99952 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN18Q99952 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN18Q99952 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
PTPN18Q99952 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
PTPN18Q99952 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTPN18Q99952 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.12■■□□□ 1.77
PTPN18Q99952 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
PTPN18Q99952 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.12■■□□□ 1.77
PTPN18Q99952 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.12■■□□□ 1.77
PTPN18Q99952 AC073111.5-205ENST00000641717 521 ntBASIC26.12■■□□□ 1.77
PTPN18Q99952 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTPN18Q99952 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.12■■□□□ 1.77
PTPN18Q99952 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
PTPN18Q99952 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTPN18Q99952 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN18Q99952 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN18Q99952 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.11■■□□□ 1.77
PTPN18Q99952 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN18Q99952 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.11■■□□□ 1.77
PTPN18Q99952 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN18Q99952 AL499627.2-201ENST00000606283 725 ntBASIC26.11■■□□□ 1.77
PTPN18Q99952 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.11■■□□□ 1.77
PTPN18Q99952 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
PTPN18Q99952 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.11■■□□□ 1.77
PTPN18Q99952 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN18Q99952 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN18Q99952 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN18Q99952 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PTPN18Q99952 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PTPN18Q99952 ALDH1A3-203ENST00000557963 1670 ntBASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms