Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 AC241377.3-202ENST00000626088 1088 ntBASIC18.29■□□□□ 0.52
ZNF48Q96MX3 AC241585.3-202ENST00000628937 1088 ntBASIC18.29■□□□□ 0.52
ZNF48Q96MX3 AC245100.8-202ENST00000629247 1058 ntBASIC18.29■□□□□ 0.52
ZNF48Q96MX3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 AC099791.1-201ENST00000416440 715 ntBASIC18.28■□□□□ 0.52
ZNF48Q96MX3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 AC136469.2-201ENST00000623944 1028 ntBASIC18.28■□□□□ 0.52
ZNF48Q96MX3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF48Q96MX3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 AC009086.3-201ENST00000623486 1008 ntBASIC18.27■□□□□ 0.52
ZNF48Q96MX3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF48Q96MX3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.27■□□□□ 0.51
ZNF48Q96MX3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
ZNF48Q96MX3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 MIR3181-201ENST00000578512 73 ntBASIC18.26■□□□□ 0.51
ZNF48Q96MX3 MIR6821-201ENST00000617625 74 ntBASIC18.26■□□□□ 0.51
ZNF48Q96MX3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF48Q96MX3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF48Q96MX3 AL161729.1-201ENST00000604104 1402 ntBASIC18.24■□□□□ 0.51
ZNF48Q96MX3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 AC104564.3-201ENST00000582367 638 ntBASIC18.24■□□□□ 0.51
ZNF48Q96MX3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF48Q96MX3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 AC097381.1-201ENST00000429019 1296 ntBASIC18.23■□□□□ 0.51
ZNF48Q96MX3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 AC087623.3-201ENST00000607047 1098 ntBASIC18.23■□□□□ 0.51
ZNF48Q96MX3 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.23■□□□□ 0.51
ZNF48Q96MX3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF48Q96MX3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF48Q96MX3 IRS3P-201ENST00000223076 1006 ntBASIC18.22■□□□□ 0.51
ZNF48Q96MX3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms