Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 AC099791.2-201ENST00000605725 427 ntBASIC20.79■□□□□ 0.92
SCMH1Q96GD3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SCMH1Q96GD3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SCMH1Q96GD3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SCMH1Q96GD3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
SCMH1Q96GD3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCMH1Q96GD3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 C17orf82-201ENST00000623772 1530 ntBASIC20.78■□□□□ 0.92
SCMH1Q96GD3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCMH1Q96GD3 AC022211.4-201ENST00000625094 2161 ntBASIC20.78■□□□□ 0.92
SCMH1Q96GD3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCMH1Q96GD3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.77■□□□□ 0.92
SCMH1Q96GD3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCMH1Q96GD3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SCMH1Q96GD3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCMH1Q96GD3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.77■□□□□ 0.92
SCMH1Q96GD3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SCMH1Q96GD3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.77■□□□□ 0.91
SCMH1Q96GD3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCMH1Q96GD3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.77■□□□□ 0.91
SCMH1Q96GD3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.76■□□□□ 0.91
SCMH1Q96GD3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.76■□□□□ 0.91
SCMH1Q96GD3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 AL138724.1-201ENST00000606771 1088 ntBASIC20.76■□□□□ 0.91
SCMH1Q96GD3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.76■□□□□ 0.91
SCMH1Q96GD3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCMH1Q96GD3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 AC241377.3-202ENST00000626088 1088 ntBASIC20.75■□□□□ 0.91
SCMH1Q96GD3 AC241585.3-202ENST00000628937 1088 ntBASIC20.75■□□□□ 0.91
SCMH1Q96GD3 AC245100.8-202ENST00000629247 1058 ntBASIC20.75■□□□□ 0.91
SCMH1Q96GD3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.75■□□□□ 0.91
SCMH1Q96GD3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCMH1Q96GD3 AP003733.4-201ENST00000623785 1697 ntBASIC20.74■□□□□ 0.91
SCMH1Q96GD3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.74■□□□□ 0.91
SCMH1Q96GD3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.74■□□□□ 0.91
SCMH1Q96GD3 AL136967.2-201ENST00000623968 743 ntBASIC20.74■□□□□ 0.91
SCMH1Q96GD3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCMH1Q96GD3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCMH1Q96GD3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 MIR939-201ENST00000401314 82 ntBASIC20.73■□□□□ 0.91
SCMH1Q96GD3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 AP001330.3-201ENST00000520123 633 ntBASIC20.73■□□□□ 0.91
SCMH1Q96GD3 AF213884.3-201ENST00000563833 479 ntBASIC20.73■□□□□ 0.91
SCMH1Q96GD3 MIR4767-201ENST00000582827 78 ntBASIC20.73■□□□□ 0.91
SCMH1Q96GD3 AC011298.3-201ENST00000615796 283 ntBASIC20.73■□□□□ 0.91
SCMH1Q96GD3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCMH1Q96GD3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.72■□□□□ 0.91
SCMH1Q96GD3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
SCMH1Q96GD3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCMH1Q96GD3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCMH1Q96GD3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCMH1Q96GD3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCMH1Q96GD3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms