Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 AL022069.1-201ENST00000568025 1636 ntBASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 AC137767.1-201ENST00000602918 1920 ntBASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC47A1Q96FL8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC47A1Q96FL8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.14■□□□□ 0.98
SLC47A1Q96FL8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC47A1Q96FL8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 AC139795.1-202ENST00000500444 432 ntBASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC47A1Q96FL8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 DUX4L18-201ENST00000553347 1267 ntBASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC47A1Q96FL8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.12■□□□□ 0.97
SLC47A1Q96FL8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 AC019171.1-201ENST00000601251 1056 ntBASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
SLC47A1Q96FL8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC47A1Q96FL8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 AC022616.5-201ENST00000518796 181 ntBASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC47A1Q96FL8 AC242852.2-201ENST00000615738 1807 ntBASIC21.08■□□□□ 0.97
SLC47A1Q96FL8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC47A1Q96FL8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC47A1Q96FL8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SLC47A1Q96FL8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC47A1Q96FL8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC47A1Q96FL8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC47A1Q96FL8 ALDH1A3-203ENST00000557963 1670 ntBASIC21.08■□□□□ 0.96
SLC47A1Q96FL8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms