Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.45■□□□□ 0.7
APOBEC3DQ96AK3 AC079630.1-202ENST00000618127 1840 ntBASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.44■□□□□ 0.7
APOBEC3DQ96AK3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC3DQ96AK3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
APOBEC3DQ96AK3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC3DQ96AK3 AC144652.1-201ENST00000609974 1624 ntBASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.4■□□□□ 0.7
APOBEC3DQ96AK3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
APOBEC3DQ96AK3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 AL356740.2-201ENST00000601559 647 ntBASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 AC009102.2-201ENST00000606772 1639 ntBASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
APOBEC3DQ96AK3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOBEC3DQ96AK3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOBEC3DQ96AK3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.38■□□□□ 0.69
APOBEC3DQ96AK3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms