Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 AC241377.3-202ENST00000626088 1088 ntBASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 AC241585.3-202ENST00000628937 1088 ntBASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 AC245100.8-202ENST00000629247 1058 ntBASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A1Q93050 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 RASA4CP-201ENST00000424092 1398 ntBASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 CA15P2-201ENST00000611168 834 ntBASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A1Q93050 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A1Q93050 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.22■■□□□ 1.63
ATP6V0A1Q93050 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATP6V0A1Q93050 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.22■■□□□ 1.63
ATP6V0A1Q93050 AC027682.1-201ENST00000562846 899 ntBASIC25.22■■□□□ 1.63
ATP6V0A1Q93050 AC008764.7-201ENST00000593779 1081 ntBASIC25.22■■□□□ 1.63
ATP6V0A1Q93050 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
ATP6V0A1Q93050 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.21■■□□□ 1.63
ATP6V0A1Q93050 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.21■■□□□ 1.63
ATP6V0A1Q93050 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ATP6V0A1Q93050 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 AC006455.2-201ENST00000429931 906 ntBASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 MIR5787-201ENST00000611784 55 ntBASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 AC092666.2-201ENST00000613287 246 ntBASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ATP6V0A1Q93050 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ATP6V0A1Q93050 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ATP6V0A1Q93050 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
ATP6V0A1Q93050 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 AC009086.3-201ENST00000623486 1008 ntBASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
ATP6V0A1Q93050 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 AC099791.1-201ENST00000416440 715 ntBASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 AC136469.2-201ENST00000623944 1028 ntBASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A1Q93050 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A1Q93050 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.16■■□□□ 1.62
ATP6V0A1Q93050 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A1Q93050 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A1Q93050 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A1Q93050 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ATP6V0A1Q93050 ABCB10P4-201ENST00000566803 2184 ntBASIC25.15■■□□□ 1.62
ATP6V0A1Q93050 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms