Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.93■□□□□ 0.78
USP9XQ93008 TPRG1LP1-201ENST00000598702 760 ntBASIC19.93■□□□□ 0.78
USP9XQ93008 BID-214ENST00000617586 542 ntTSL 5 BASIC19.93■□□□□ 0.78
USP9XQ93008 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.93■□□□□ 0.78
USP9XQ93008 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.93■□□□□ 0.78
USP9XQ93008 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.93■□□□□ 0.78
USP9XQ93008 LINC02228-203ENST00000641970 1355 ntBASIC19.93■□□□□ 0.78
USP9XQ93008 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.93■□□□□ 0.78
USP9XQ93008 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP9XQ93008 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP9XQ93008 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.92■□□□□ 0.78
USP9XQ93008 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
USP9XQ93008 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
USP9XQ93008 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP9XQ93008 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP9XQ93008 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP9XQ93008 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP9XQ93008 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
USP9XQ93008 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP9XQ93008 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP9XQ93008 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.91■□□□□ 0.78
USP9XQ93008 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP9XQ93008 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.91■□□□□ 0.78
USP9XQ93008 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP9XQ93008 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP9XQ93008 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP9XQ93008 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP9XQ93008 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
USP9XQ93008 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.91■□□□□ 0.78
USP9XQ93008 KRT18P6-201ENST00000555540 1265 ntBASIC19.91■□□□□ 0.78
USP9XQ93008 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.91■□□□□ 0.78
USP9XQ93008 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
USP9XQ93008 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP9XQ93008 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
USP9XQ93008 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP9XQ93008 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP9XQ93008 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.9■□□□□ 0.78
USP9XQ93008 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP9XQ93008 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP9XQ93008 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP9XQ93008 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.9■□□□□ 0.78
USP9XQ93008 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.9■□□□□ 0.78
USP9XQ93008 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.9■□□□□ 0.78
USP9XQ93008 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USP9XQ93008 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP9XQ93008 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.9■□□□□ 0.78
USP9XQ93008 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
USP9XQ93008 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.89■□□□□ 0.78
USP9XQ93008 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.89■□□□□ 0.77
USP9XQ93008 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.89■□□□□ 0.77
USP9XQ93008 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
USP9XQ93008 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP9XQ93008 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP9XQ93008 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.89■□□□□ 0.77
USP9XQ93008 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.89■□□□□ 0.77
USP9XQ93008 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.89■□□□□ 0.77
USP9XQ93008 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP9XQ93008 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP9XQ93008 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP9XQ93008 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP9XQ93008 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP9XQ93008 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP9XQ93008 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP9XQ93008 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP9XQ93008 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP9XQ93008 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP9XQ93008 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP9XQ93008 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.87■□□□□ 0.77
USP9XQ93008 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.87■□□□□ 0.77
USP9XQ93008 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USP9XQ93008 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP9XQ93008 AC073210.2-201ENST00000430369 194 ntBASIC19.87■□□□□ 0.77
USP9XQ93008 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.87■□□□□ 0.77
USP9XQ93008 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP9XQ93008 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP9XQ93008 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.86■□□□□ 0.77
USP9XQ93008 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.86■□□□□ 0.77
USP9XQ93008 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
USP9XQ93008 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP9XQ93008 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP9XQ93008 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP9XQ93008 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.86■□□□□ 0.77
USP9XQ93008 MFSD11-216ENST00000590393 1141 ntBASIC19.86■□□□□ 0.77
USP9XQ93008 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP9XQ93008 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.86■□□□□ 0.77
USP9XQ93008 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP9XQ93008 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.85■□□□□ 0.77
USP9XQ93008 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.85■□□□□ 0.77
USP9XQ93008 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP9XQ93008 AC069152.1-201ENST00000438030 544 ntBASIC19.85■□□□□ 0.77
USP9XQ93008 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.85■□□□□ 0.77
USP9XQ93008 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms