Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCD2Q8WV60 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCD2Q8WV60 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCD2Q8WV60 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCD2Q8WV60 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCD2Q8WV60 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 AC131281.2-201ENST00000520478 145 ntBASIC22.73■■□□□ 1.23
PTCD2Q8WV60 MIR3621-201ENST00000580529 85 ntBASIC22.73■■□□□ 1.23
PTCD2Q8WV60 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.73■■□□□ 1.23
PTCD2Q8WV60 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCD2Q8WV60 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 MIR6722-201ENST00000617286 78 ntBASIC22.72■■□□□ 1.23
PTCD2Q8WV60 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.72■■□□□ 1.23
PTCD2Q8WV60 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCD2Q8WV60 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCD2Q8WV60 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 AC008406.3-201ENST00000620001 1374 ntBASIC22.69■■□□□ 1.22
PTCD2Q8WV60 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms