Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPEB3Q8NE35 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPEB3Q8NE35 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 AL117332.1-201ENST00000622628 974 ntBASIC19.61■□□□□ 0.73
CPEB3Q8NE35 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.61■□□□□ 0.73
CPEB3Q8NE35 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 AC009102.2-201ENST00000606772 1639 ntBASIC19.6■□□□□ 0.73
CPEB3Q8NE35 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPEB3Q8NE35 AC092068.2-201ENST00000590491 1708 ntBASIC19.59■□□□□ 0.73
CPEB3Q8NE35 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 MIR3621-201ENST00000580529 85 ntBASIC19.59■□□□□ 0.73
CPEB3Q8NE35 AC079630.1-202ENST00000618127 1840 ntBASIC19.59■□□□□ 0.73
CPEB3Q8NE35 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPEB3Q8NE35 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPEB3Q8NE35 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPEB3Q8NE35 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPEB3Q8NE35 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CPEB3Q8NE35 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPEB3Q8NE35 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPEB3Q8NE35 AL356740.2-201ENST00000601559 647 ntBASIC19.58■□□□□ 0.72
CPEB3Q8NE35 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.58■□□□□ 0.72
CPEB3Q8NE35 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CPEB3Q8NE35 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPEB3Q8NE35 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPEB3Q8NE35 DUSP8P5-201ENST00000422884 1815 ntBASIC19.58■□□□□ 0.72
CPEB3Q8NE35 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPEB3Q8NE35 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPEB3Q8NE35 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CPEB3Q8NE35 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms