Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 AC087239.1-201ENST00000622671 572 ntBASIC19.06■□□□□ 0.64
CCDC168Q8NDH2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 KRT18P6-201ENST00000555540 1265 ntBASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC168Q8NDH2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 ERN1-208ENST00000606895 2068 ntBASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC168Q8NDH2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC168Q8NDH2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC168Q8NDH2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC168Q8NDH2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC168Q8NDH2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC168Q8NDH2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC168Q8NDH2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC168Q8NDH2 PRORSD1P-201ENST00000295112 541 ntBASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 AC073210.2-201ENST00000430369 194 ntBASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC168Q8NDH2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC168Q8NDH2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC168Q8NDH2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 TPRG1LP1-201ENST00000598702 760 ntBASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC168Q8NDH2 KRT19P1-201ENST00000405746 1186 ntBASIC19■□□□□ 0.63
CCDC168Q8NDH2 MFSD11-216ENST00000590393 1141 ntBASIC19■□□□□ 0.63
CCDC168Q8NDH2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19■□□□□ 0.63
CCDC168Q8NDH2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19■□□□□ 0.63
CCDC168Q8NDH2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19■□□□□ 0.63
CCDC168Q8NDH2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 GUSBP6-202ENST00000438529 1198 ntBASIC19■□□□□ 0.63
CCDC168Q8NDH2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19■□□□□ 0.63
CCDC168Q8NDH2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC168Q8NDH2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC168Q8NDH2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 AL022069.1-201ENST00000568025 1636 ntBASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms