Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
TTC13Q8NBP0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC13Q8NBP0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 AL117328.2-201ENST00000624617 1940 ntBASIC23.24■■□□□ 1.31
TTC13Q8NBP0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 AC233723.2-201ENST00000623798 2106 ntBASIC23.24■■□□□ 1.31
TTC13Q8NBP0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TTC13Q8NBP0 KRT8P33-201ENST00000508125 1423 ntBASIC23.24■■□□□ 1.31
TTC13Q8NBP0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC13Q8NBP0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 C1orf229-201ENST00000623686 2258 ntBASIC23.22■■□□□ 1.31
TTC13Q8NBP0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.22■■□□□ 1.31
TTC13Q8NBP0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC13Q8NBP0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 AL031848.2-201ENST00000607670 837 ntBASIC23.2■■□□□ 1.3
TTC13Q8NBP0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC13Q8NBP0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TTC13Q8NBP0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TTC13Q8NBP0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TTC13Q8NBP0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.19■■□□□ 1.3
TTC13Q8NBP0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TTC13Q8NBP0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC13Q8NBP0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC13Q8NBP0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TTC13Q8NBP0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TTC13Q8NBP0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TTC13Q8NBP0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.17■■□□□ 1.3
TTC13Q8NBP0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC13Q8NBP0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC13Q8NBP0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TTC13Q8NBP0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC13Q8NBP0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC13Q8NBP0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC13Q8NBP0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.16■■□□□ 1.3
TTC13Q8NBP0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC13Q8NBP0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
TTC13Q8NBP0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.15■■□□□ 1.3
TTC13Q8NBP0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC13Q8NBP0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms