Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ARHGEF39Q8N4T4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 AC006455.2-201ENST00000429931 906 ntBASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 AL139246.5-201ENST00000606645 996 ntBASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.32■■□□□ 1
ARHGEF39Q8N4T4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARHGEF39Q8N4T4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 UNC93B3-201ENST00000308076 687 ntBASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ARHGEF39Q8N4T4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 AC144652.1-201ENST00000609974 1624 ntBASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 FP325331.1-202ENST00000623531 1380 ntBASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 AC092171.4-201ENST00000609130 632 ntBASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF39Q8N4T4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 AC079630.1-202ENST00000618127 1840 ntBASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 DUX4L19-201ENST00000557448 1267 ntBASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF39Q8N4T4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 DUX4L4-201ENST00000566884 1269 ntBASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 AC106739.1-201ENST00000617035 715 ntBASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 AC009086.3-201ENST00000623486 1008 ntBASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF39Q8N4T4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF39Q8N4T4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF39Q8N4T4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 MIR638-201ENST00000385237 100 ntBASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.26■□□□□ 0.99
ARHGEF39Q8N4T4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 AC133561.4-201ENST00000566112 224 ntBASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 MIR3181-201ENST00000578512 73 ntBASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 AL138724.1-201ENST00000606771 1088 ntBASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 AL136162.1-201ENST00000607711 1078 ntBASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 SYT6-210ENST00000641643 1587 ntBASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF39Q8N4T4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms