Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC35.52■■■■□ 3.28
VPS8Q8N3P4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC35.52■■■■□ 3.28
VPS8Q8N3P4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC35.52■■■■□ 3.28
VPS8Q8N3P4 AL138724.1-201ENST00000606771 1088 ntBASIC35.51■■■■□ 3.28
VPS8Q8N3P4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC35.51■■■■□ 3.28
VPS8Q8N3P4 H19-210ENST00000439725 1929 ntTSL 2 BASIC35.51■■■■□ 3.28
VPS8Q8N3P4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC35.51■■■■□ 3.27
VPS8Q8N3P4 SYT6-210ENST00000641643 1587 ntBASIC35.51■■■■□ 3.27
VPS8Q8N3P4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
VPS8Q8N3P4 AC144652.1-201ENST00000609974 1624 ntBASIC35.49■■■■□ 3.27
VPS8Q8N3P4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC35.49■■■■□ 3.27
VPS8Q8N3P4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC35.49■■■■□ 3.27
VPS8Q8N3P4 AC093323.1-202ENST00000635031 2045 ntBASIC35.49■■■■□ 3.27
VPS8Q8N3P4 AC019069.1-201ENST00000610008 1333 ntBASIC35.49■■■■□ 3.27
VPS8Q8N3P4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC35.49■■■■□ 3.27
VPS8Q8N3P4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC35.49■■■■□ 3.27
VPS8Q8N3P4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC35.49■■■■□ 3.27
VPS8Q8N3P4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC35.48■■■■□ 3.27
VPS8Q8N3P4 AC079630.1-202ENST00000618127 1840 ntBASIC35.48■■■■□ 3.27
VPS8Q8N3P4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC35.48■■■■□ 3.27
VPS8Q8N3P4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
VPS8Q8N3P4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
VPS8Q8N3P4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
VPS8Q8N3P4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
VPS8Q8N3P4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC35.47■■■■□ 3.27
VPS8Q8N3P4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
VPS8Q8N3P4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
VPS8Q8N3P4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC35.47■■■■□ 3.27
VPS8Q8N3P4 MIR4767-201ENST00000582827 78 ntBASIC35.47■■■■□ 3.27
VPS8Q8N3P4 AC136469.2-201ENST00000623944 1028 ntBASIC35.47■■■■□ 3.27
VPS8Q8N3P4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
VPS8Q8N3P4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
VPS8Q8N3P4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.46■■■■□ 3.27
VPS8Q8N3P4 MIR3181-201ENST00000578512 73 ntBASIC35.46■■■■□ 3.27
VPS8Q8N3P4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC35.46■■■■□ 3.27
VPS8Q8N3P4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
VPS8Q8N3P4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC35.45■■■■□ 3.27
VPS8Q8N3P4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC35.45■■■■□ 3.27
VPS8Q8N3P4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
VPS8Q8N3P4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
VPS8Q8N3P4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
VPS8Q8N3P4 PBX2P1-201ENST00000493219 1291 ntBASIC35.44■■■■□ 3.26
VPS8Q8N3P4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
VPS8Q8N3P4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC35.44■■■■□ 3.26
VPS8Q8N3P4 AP001330.3-201ENST00000520123 633 ntBASIC35.43■■■■□ 3.26
VPS8Q8N3P4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
VPS8Q8N3P4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
VPS8Q8N3P4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
VPS8Q8N3P4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC35.42■■■■□ 3.26
VPS8Q8N3P4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC35.42■■■■□ 3.26
VPS8Q8N3P4 SUDS3P1-201ENST00000505831 966 ntBASIC35.42■■■■□ 3.26
VPS8Q8N3P4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC35.42■■■■□ 3.26
VPS8Q8N3P4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
VPS8Q8N3P4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
VPS8Q8N3P4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC35.42■■■■□ 3.26
VPS8Q8N3P4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC35.42■■■■□ 3.26
VPS8Q8N3P4 DUX4L4-201ENST00000566884 1269 ntBASIC35.41■■■■□ 3.26
VPS8Q8N3P4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC35.41■■■■□ 3.26
VPS8Q8N3P4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
VPS8Q8N3P4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
VPS8Q8N3P4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
VPS8Q8N3P4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
VPS8Q8N3P4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
VPS8Q8N3P4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
VPS8Q8N3P4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
VPS8Q8N3P4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
VPS8Q8N3P4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
VPS8Q8N3P4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC35.4■■■■□ 3.26
VPS8Q8N3P4 EDA-201ENST00000338901 1233 ntBASIC35.4■■■■□ 3.26
VPS8Q8N3P4 AL499627.2-201ENST00000606283 725 ntBASIC35.4■■■■□ 3.26
VPS8Q8N3P4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC35.39■■■■□ 3.26
VPS8Q8N3P4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC35.39■■■■□ 3.26
VPS8Q8N3P4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
VPS8Q8N3P4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 FP325331.1-202ENST00000623531 1380 ntBASIC35.38■■■■□ 3.25
VPS8Q8N3P4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
VPS8Q8N3P4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
VPS8Q8N3P4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
VPS8Q8N3P4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
VPS8Q8N3P4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC35.37■■■■□ 3.25
VPS8Q8N3P4 pRNA.6-201ENST00000610482 90 ntBASIC35.37■■■■□ 3.25
VPS8Q8N3P4 pRNA.5-201ENST00000612139 90 ntBASIC35.37■■■■□ 3.25
VPS8Q8N3P4 pRNA.11-201ENST00000618423 90 ntBASIC35.37■■■■□ 3.25
VPS8Q8N3P4 pRNA.13-201ENST00000619112 90 ntBASIC35.37■■■■□ 3.25
VPS8Q8N3P4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms