Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPNE8Q86YQ8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.65■■□□□ 1.38
CPNE8Q86YQ8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CPNE8Q86YQ8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.64■■□□□ 1.38
CPNE8Q86YQ8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPNE8Q86YQ8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 AC137630.3-201ENST00000607245 391 ntBASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CPNE8Q86YQ8 AC233723.2-201ENST00000623798 2106 ntBASIC23.63■■□□□ 1.37
CPNE8Q86YQ8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE8Q86YQ8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.63■■□□□ 1.37
CPNE8Q86YQ8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.63■■□□□ 1.37
CPNE8Q86YQ8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.63■■□□□ 1.37
CPNE8Q86YQ8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.62■■□□□ 1.37
CPNE8Q86YQ8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.62■■□□□ 1.37
CPNE8Q86YQ8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPNE8Q86YQ8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.62■■□□□ 1.37
CPNE8Q86YQ8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPNE8Q86YQ8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CPNE8Q86YQ8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CPNE8Q86YQ8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 EP400NL-214ENST00000641289 2402 ntBASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE8Q86YQ8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE8Q86YQ8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 RARRES2P1-201ENST00000474487 481 ntBASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE8Q86YQ8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CPNE8Q86YQ8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CPNE8Q86YQ8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.58■■□□□ 1.36
CPNE8Q86YQ8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE8Q86YQ8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 AC021242.3-201ENST00000607598 1377 ntBASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE8Q86YQ8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 AC079834.2-201ENST00000609776 1949 ntBASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 AL117328.2-201ENST00000624617 1940 ntBASIC23.55■■□□□ 1.36
CPNE8Q86YQ8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE8Q86YQ8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE8Q86YQ8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.54■■□□□ 1.36
CPNE8Q86YQ8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.54■■□□□ 1.36
CPNE8Q86YQ8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.54■■□□□ 1.36
CPNE8Q86YQ8 AL353803.4-201ENST00000565882 1934 ntBASIC23.54■■□□□ 1.36
CPNE8Q86YQ8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms