Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRC28Q86X40 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC28Q86X40 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC28Q86X40 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC28Q86X40 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC28Q86X40 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC28Q86X40 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRRC28Q86X40 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC28Q86X40 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC28Q86X40 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC28Q86X40 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC28Q86X40 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC28Q86X40 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC28Q86X40 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC28Q86X40 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC28Q86X40 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC28Q86X40 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC28Q86X40 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC28Q86X40 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC28Q86X40 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC28Q86X40 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC28Q86X40 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LRRC28Q86X40 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LRRC28Q86X40 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRC28Q86X40 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LRRC28Q86X40 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC28Q86X40 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRRC28Q86X40 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LRRC28Q86X40 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 FOXO3B-201ENST00000395675 1928 ntBASIC19.89■□□□□ 0.77
LRRC28Q86X40 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC28Q86X40 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC28Q86X40 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC28Q86X40 AC007375.3-201ENST00000600936 2314 ntBASIC19.89■□□□□ 0.77
LRRC28Q86X40 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC28Q86X40 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC28Q86X40 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC28Q86X40 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC28Q86X40 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC28Q86X40 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC28Q86X40 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC28Q86X40 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC28Q86X40 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC28Q86X40 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC28Q86X40 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC28Q86X40 AC103724.3-201ENST00000564481 992 ntBASIC19.88■□□□□ 0.77
LRRC28Q86X40 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC28Q86X40 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC28Q86X40 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC28Q86X40 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC28Q86X40 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC28Q86X40 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LRRC28Q86X40 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC28Q86X40 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC28Q86X40 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC28Q86X40 AL451085.2-201ENST00000605085 799 ntBASIC19.86■□□□□ 0.77
LRRC28Q86X40 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms