Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRRTM3Q86VH5 AP001330.3-201ENST00000520123 633 ntBASIC23.85■■□□□ 1.41
LRRTM3Q86VH5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRRTM3Q86VH5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.85■■□□□ 1.41
LRRTM3Q86VH5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRRTM3Q86VH5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 MIR939-201ENST00000401314 82 ntBASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRTM3Q86VH5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 pRNA.6-201ENST00000610482 90 ntBASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 pRNA.5-201ENST00000612139 90 ntBASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 pRNA.11-201ENST00000618423 90 ntBASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 pRNA.13-201ENST00000619112 90 ntBASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LRRTM3Q86VH5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LRRTM3Q86VH5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRRTM3Q86VH5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRTM3Q86VH5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.82■■□□□ 1.4
LRRTM3Q86VH5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRTM3Q86VH5 AC136469.2-201ENST00000623944 1028 ntBASIC23.82■■□□□ 1.4
LRRTM3Q86VH5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRRTM3Q86VH5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM3Q86VH5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
LRRTM3Q86VH5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM3Q86VH5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LRRTM3Q86VH5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM3Q86VH5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM3Q86VH5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRTM3Q86VH5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM3Q86VH5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM3Q86VH5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 AC008764.7-201ENST00000593779 1081 ntBASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM3Q86VH5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 AC091305.1-201ENST00000479476 895 ntBASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 FP325331.1-202ENST00000623531 1380 ntBASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM3Q86VH5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 AC105265.2-201ENST00000467189 838 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms