Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
DDX53Q86TM3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX53Q86TM3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
DDX53Q86TM3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX53Q86TM3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX53Q86TM3 NME4-202ENST00000382940 766 ntTSL 3 BASIC24■■□□□ 1.43
DDX53Q86TM3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24■■□□□ 1.43
DDX53Q86TM3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24■■□□□ 1.43
DDX53Q86TM3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX53Q86TM3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24■■□□□ 1.43
DDX53Q86TM3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX53Q86TM3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX53Q86TM3 AC022211.4-201ENST00000625094 2161 ntBASIC23.99■■□□□ 1.43
DDX53Q86TM3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX53Q86TM3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
DDX53Q86TM3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX53Q86TM3 IGHV3-19-201ENST00000521488 291 ntBASIC23.99■■□□□ 1.43
DDX53Q86TM3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.99■■□□□ 1.43
DDX53Q86TM3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.99■■□□□ 1.43
DDX53Q86TM3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX53Q86TM3 AL358852.1-201ENST00000623174 1268 ntBASIC23.99■■□□□ 1.43
DDX53Q86TM3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX53Q86TM3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX53Q86TM3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX53Q86TM3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX53Q86TM3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX53Q86TM3 AC133637.1-201ENST00000624115 1537 ntBASIC23.98■■□□□ 1.43
DDX53Q86TM3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX53Q86TM3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
DDX53Q86TM3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
DDX53Q86TM3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX53Q86TM3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.97■■□□□ 1.43
DDX53Q86TM3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.97■■□□□ 1.43
DDX53Q86TM3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX53Q86TM3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.97■■□□□ 1.43
DDX53Q86TM3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX53Q86TM3 AL499627.2-201ENST00000606283 725 ntBASIC23.97■■□□□ 1.43
DDX53Q86TM3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX53Q86TM3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX53Q86TM3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX53Q86TM3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX53Q86TM3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX53Q86TM3 AL031602.1-201ENST00000633169 911 ntBASIC23.96■■□□□ 1.43
DDX53Q86TM3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
DDX53Q86TM3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX53Q86TM3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
DDX53Q86TM3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX53Q86TM3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX53Q86TM3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
DDX53Q86TM3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX53Q86TM3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX53Q86TM3 MIR572-201ENST00000384983 95 ntBASIC23.95■■□□□ 1.42
DDX53Q86TM3 AC027612.3-201ENST00000413684 1047 ntBASIC23.95■■□□□ 1.42
DDX53Q86TM3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.95■■□□□ 1.42
DDX53Q86TM3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX53Q86TM3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX53Q86TM3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.94■■□□□ 1.42
DDX53Q86TM3 FP325331.1-202ENST00000623531 1380 ntBASIC23.94■■□□□ 1.42
DDX53Q86TM3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
DDX53Q86TM3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.94■■□□□ 1.42
DDX53Q86TM3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX53Q86TM3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
DDX53Q86TM3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
DDX53Q86TM3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX53Q86TM3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX53Q86TM3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX53Q86TM3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
DDX53Q86TM3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX53Q86TM3 KRT18P5-201ENST00000436075 1291 ntBASIC23.93■■□□□ 1.42
DDX53Q86TM3 AC123595.1-201ENST00000440769 1046 ntBASIC23.93■■□□□ 1.42
DDX53Q86TM3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX53Q86TM3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX53Q86TM3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX53Q86TM3 AC135731.1-201ENST00000569415 2548 ntBASIC23.93■■□□□ 1.42
DDX53Q86TM3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
DDX53Q86TM3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX53Q86TM3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX53Q86TM3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX53Q86TM3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX53Q86TM3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.92■■□□□ 1.42
DDX53Q86TM3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX53Q86TM3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
DDX53Q86TM3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX53Q86TM3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms