Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 AC012414.1-201ENST00000556676 535 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 NTF6G-201ENST00000591094 616 ntBASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 AC066615.1-201ENST00000640911 628 ntBASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
VPS13BQ7Z7G8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 AC022211.4-201ENST00000625094 2161 ntBASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 GUSBP6-202ENST00000438529 1198 ntBASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS13BQ7Z7G8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS13BQ7Z7G8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.02□□□□□ -0.16
VPS13BQ7Z7G8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS13BQ7Z7G8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VPS13BQ7Z7G8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS13BQ7Z7G8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VPS13BQ7Z7G8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 MIR6089-201ENST00000616698 64 ntBASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS13BQ7Z7G8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 AC073111.5-205ENST00000641717 521 ntBASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 AL022069.1-201ENST00000568025 1636 ntBASIC14.01□□□□□ -0.17
VPS13BQ7Z7G8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 AC091060.1-201ENST00000623524 1766 ntBASIC14□□□□□ -0.17
VPS13BQ7Z7G8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14□□□□□ -0.17
VPS13BQ7Z7G8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14□□□□□ -0.17
VPS13BQ7Z7G8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 442.7 ms