Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.39■■□□□ 1.65
NIPA1Q7RTP0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NIPA1Q7RTP0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 EDA-201ENST00000338901 1233 ntBASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 DUX4L4-201ENST00000566884 1269 ntBASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NIPA1Q7RTP0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 AL031432.3-201ENST00000607698 485 ntBASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 AC019069.1-201ENST00000610008 1333 ntBASIC25.37■■□□□ 1.65
NIPA1Q7RTP0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NIPA1Q7RTP0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
NIPA1Q7RTP0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.35■■□□□ 1.65
NIPA1Q7RTP0 AC136469.2-201ENST00000623944 1028 ntBASIC25.35■■□□□ 1.65
NIPA1Q7RTP0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.34■■□□□ 1.65
NIPA1Q7RTP0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NIPA1Q7RTP0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.34■■□□□ 1.65
NIPA1Q7RTP0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.34■■□□□ 1.65
NIPA1Q7RTP0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.34■■□□□ 1.65
NIPA1Q7RTP0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NIPA1Q7RTP0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NIPA1Q7RTP0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 SUDS3P1-201ENST00000505831 966 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 MIR4767-201ENST00000582827 78 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 AL499627.2-201ENST00000606283 725 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 pRNA.6-201ENST00000610482 90 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 pRNA.5-201ENST00000612139 90 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 pRNA.11-201ENST00000618423 90 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 pRNA.13-201ENST00000619112 90 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 AL355001.2-201ENST00000620617 1191 ntBASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NIPA1Q7RTP0 LINC01529-204ENST00000636474 1715 ntBASIC25.32■■□□□ 1.64
NIPA1Q7RTP0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.32■■□□□ 1.64
NIPA1Q7RTP0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NIPA1Q7RTP0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NIPA1Q7RTP0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NIPA1Q7RTP0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NIPA1Q7RTP0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NIPA1Q7RTP0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NIPA1Q7RTP0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.31■■□□□ 1.64
NIPA1Q7RTP0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.31■■□□□ 1.64
NIPA1Q7RTP0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NIPA1Q7RTP0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.3■■□□□ 1.64
NIPA1Q7RTP0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.3■■□□□ 1.64
NIPA1Q7RTP0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.3■■□□□ 1.64
NIPA1Q7RTP0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NIPA1Q7RTP0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
NIPA1Q7RTP0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NIPA1Q7RTP0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NIPA1Q7RTP0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NIPA1Q7RTP0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
NIPA1Q7RTP0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
NIPA1Q7RTP0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NIPA1Q7RTP0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NIPA1Q7RTP0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NIPA1Q7RTP0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.28■■□□□ 1.64
NIPA1Q7RTP0 AC079630.1-202ENST00000618127 1840 ntBASIC25.28■■□□□ 1.64
NIPA1Q7RTP0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NIPA1Q7RTP0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
NIPA1Q7RTP0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms