Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPNS3Q6ZMD2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SPNS3Q6ZMD2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 AL358852.1-201ENST00000623174 1268 ntBASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 AC245100.8-202ENST00000629247 1058 ntBASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 AC066615.1-201ENST00000640911 628 ntBASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPNS3Q6ZMD2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPNS3Q6ZMD2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SPNS3Q6ZMD2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SPNS3Q6ZMD2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPNS3Q6ZMD2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SPNS3Q6ZMD2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPNS3Q6ZMD2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SPNS3Q6ZMD2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPNS3Q6ZMD2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 CLDN5-201ENST00000403084 2357 ntBASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 NTF6G-201ENST00000591094 616 ntBASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 AP004609.3-201ENST00000610705 1884 ntBASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPNS3Q6ZMD2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 AC090877.2-201ENST00000558441 1738 ntBASIC19.37■□□□□ 0.69
SPNS3Q6ZMD2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPNS3Q6ZMD2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 LINC00543-201ENST00000567234 1845 ntBASIC19.35■□□□□ 0.69
SPNS3Q6ZMD2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPNS3Q6ZMD2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPNS3Q6ZMD2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPNS3Q6ZMD2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SPNS3Q6ZMD2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPNS3Q6ZMD2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms