Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.55■■□□□ 1.36
PTCRAQ6ISU1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PTCRAQ6ISU1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.55■■□□□ 1.36
PTCRAQ6ISU1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTCRAQ6ISU1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.54■■□□□ 1.36
PTCRAQ6ISU1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.53■■□□□ 1.36
PTCRAQ6ISU1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCRAQ6ISU1 AC133637.1-201ENST00000624115 1537 ntBASIC23.53■■□□□ 1.36
PTCRAQ6ISU1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCRAQ6ISU1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCRAQ6ISU1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 AC105233.4-201ENST00000642045 216 ntBASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.52■■□□□ 1.36
PTCRAQ6ISU1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 AC010525.1-201ENST00000585559 441 ntBASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 AL499627.2-201ENST00000606283 725 ntBASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PTCRAQ6ISU1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCRAQ6ISU1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCRAQ6ISU1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 GPX1P1-201ENST00000388829 606 ntBASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.48■■□□□ 1.35
PTCRAQ6ISU1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 MIR663A-201ENST00000385250 93 ntBASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCRAQ6ISU1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.46■■□□□ 1.35
PTCRAQ6ISU1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms