Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 TSPY11P-201ENST00000442607 1045 ntBASIC26.1■■□□□ 1.77
KRT40Q6A162 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.1■■□□□ 1.77
KRT40Q6A162 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.1■■□□□ 1.77
KRT40Q6A162 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.1■■□□□ 1.77
KRT40Q6A162 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.1■■□□□ 1.77
KRT40Q6A162 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KRT40Q6A162 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.09■■□□□ 1.77
KRT40Q6A162 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KRT40Q6A162 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KRT40Q6A162 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KRT40Q6A162 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.09■■□□□ 1.77
KRT40Q6A162 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.09■■□□□ 1.77
KRT40Q6A162 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KRT40Q6A162 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
KRT40Q6A162 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
KRT40Q6A162 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
KRT40Q6A162 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.08■■□□□ 1.77
KRT40Q6A162 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.08■■□□□ 1.77
KRT40Q6A162 C9orf163-202ENST00000624034 2573 ntBASIC26.08■■□□□ 1.77
KRT40Q6A162 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.08■■□□□ 1.77
KRT40Q6A162 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
KRT40Q6A162 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.07■■□□□ 1.76
KRT40Q6A162 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.07■■□□□ 1.76
KRT40Q6A162 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
KRT40Q6A162 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
KRT40Q6A162 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.07■■□□□ 1.76
KRT40Q6A162 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
KRT40Q6A162 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.07■■□□□ 1.76
KRT40Q6A162 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
KRT40Q6A162 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
KRT40Q6A162 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KRT40Q6A162 AC131281.2-201ENST00000520478 145 ntBASIC26.06■■□□□ 1.76
KRT40Q6A162 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
KRT40Q6A162 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KRT40Q6A162 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
KRT40Q6A162 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.06■■□□□ 1.76
KRT40Q6A162 DUSP8P3-201ENST00000399571 1760 ntBASIC26.05■■□□□ 1.76
KRT40Q6A162 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
KRT40Q6A162 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.05■■□□□ 1.76
KRT40Q6A162 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
KRT40Q6A162 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
KRT40Q6A162 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
KRT40Q6A162 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.05■■□□□ 1.76
KRT40Q6A162 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.05■■□□□ 1.76
KRT40Q6A162 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
KRT40Q6A162 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.04■■□□□ 1.76
KRT40Q6A162 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KRT40Q6A162 AC068473.5-201ENST00000616428 2072 ntBASIC26.04■■□□□ 1.76
KRT40Q6A162 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.04■■□□□ 1.76
KRT40Q6A162 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KRT40Q6A162 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.04■■□□□ 1.76
KRT40Q6A162 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
KRT40Q6A162 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KRT40Q6A162 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KRT40Q6A162 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KRT40Q6A162 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KRT40Q6A162 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KRT40Q6A162 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
KRT40Q6A162 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
KRT40Q6A162 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KRT40Q6A162 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
KRT40Q6A162 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KRT40Q6A162 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KRT40Q6A162 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KRT40Q6A162 AC079630.1-202ENST00000618127 1840 ntBASIC26.02■■□□□ 1.76
KRT40Q6A162 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
KRT40Q6A162 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KRT40Q6A162 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
KRT40Q6A162 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.02■■□□□ 1.76
KRT40Q6A162 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KRT40Q6A162 AC133561.1-201ENST00000568600 2415 ntBASIC26.02■■□□□ 1.76
KRT40Q6A162 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
KRT40Q6A162 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
KRT40Q6A162 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
KRT40Q6A162 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
KRT40Q6A162 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.01■■□□□ 1.75
KRT40Q6A162 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.01■■□□□ 1.75
KRT40Q6A162 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
KRT40Q6A162 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
KRT40Q6A162 AC005703.6-201ENST00000623265 1329 ntBASIC26.01■■□□□ 1.75
KRT40Q6A162 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
KRT40Q6A162 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
KRT40Q6A162 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
KRT40Q6A162 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26■■□□□ 1.75
KRT40Q6A162 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26■■□□□ 1.75
KRT40Q6A162 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
KRT40Q6A162 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26■■□□□ 1.75
KRT40Q6A162 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26■■□□□ 1.75
KRT40Q6A162 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26■■□□□ 1.75
KRT40Q6A162 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26■■□□□ 1.75
KRT40Q6A162 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26■■□□□ 1.75
KRT40Q6A162 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26■■□□□ 1.75
KRT40Q6A162 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26■■□□□ 1.75
KRT40Q6A162 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
KRT40Q6A162 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
KRT40Q6A162 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.99■■□□□ 1.75
KRT40Q6A162 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms