Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VPS13DQ5THJ4 ESRRAP2-201ENST00000418437 1549 ntBASIC15.37■□□□□ 0.05
VPS13DQ5THJ4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS13DQ5THJ4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 AC133637.1-201ENST00000624115 1537 ntBASIC15.36■□□□□ 0.05
VPS13DQ5THJ4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 AC006015.1-201ENST00000429970 570 ntBASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS13DQ5THJ4 AC091060.1-201ENST00000623524 1766 ntBASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 MIR6084-201ENST00000622012 110 ntBASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13DQ5THJ4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
VPS13DQ5THJ4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS13DQ5THJ4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
VPS13DQ5THJ4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS13DQ5THJ4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 TPRG1LP1-201ENST00000598702 760 ntBASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
VPS13DQ5THJ4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 ABHD17AP1-201ENST00000358206 933 ntBASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 OR2I1P-207ENST00000453522 948 ntBASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 IGHV3-19-201ENST00000521488 291 ntBASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 MIR572-201ENST00000384983 95 ntBASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13DQ5THJ4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms