Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RBM48Q5RL73 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RBM48Q5RL73 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RBM48Q5RL73 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RBM48Q5RL73 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RBM48Q5RL73 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBM48Q5RL73 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBM48Q5RL73 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.52■□□□□ 0.88
RBM48Q5RL73 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBM48Q5RL73 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.52■□□□□ 0.87
RBM48Q5RL73 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.51■□□□□ 0.87
RBM48Q5RL73 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 KRT18P10-201ENST00000388836 1287 ntBASIC20.51■□□□□ 0.87
RBM48Q5RL73 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBM48Q5RL73 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 AC026310.3-201ENST00000625186 2373 ntBASIC20.5■□□□□ 0.87
RBM48Q5RL73 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBM48Q5RL73 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
RBM48Q5RL73 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBM48Q5RL73 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBM48Q5RL73 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBM48Q5RL73 AL157400.5-201ENST00000507624 621 ntBASIC20.49■□□□□ 0.87
RBM48Q5RL73 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RBM48Q5RL73 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBM48Q5RL73 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBM48Q5RL73 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBM48Q5RL73 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RBM48Q5RL73 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
RBM48Q5RL73 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RBM48Q5RL73 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RBM48Q5RL73 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RBM48Q5RL73 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RBM48Q5RL73 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.48■□□□□ 0.87
RBM48Q5RL73 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.48■□□□□ 0.87
RBM48Q5RL73 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RBM48Q5RL73 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RBM48Q5RL73 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RBM48Q5RL73 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RBM48Q5RL73 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 AL121603.2-201ENST00000557373 2117 ntBASIC20.47■□□□□ 0.87
RBM48Q5RL73 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RBM48Q5RL73 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.47■□□□□ 0.87
RBM48Q5RL73 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.47■□□□□ 0.87
RBM48Q5RL73 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RBM48Q5RL73 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.47■□□□□ 0.87
RBM48Q5RL73 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.46■□□□□ 0.87
RBM48Q5RL73 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RBM48Q5RL73 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RBM48Q5RL73 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.46■□□□□ 0.87
RBM48Q5RL73 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
RBM48Q5RL73 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RBM48Q5RL73 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms