Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
TRIM60Q495X7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM60Q495X7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM60Q495X7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM60Q495X7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM60Q495X7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM60Q495X7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM60Q495X7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM60Q495X7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM60Q495X7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM60Q495X7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM60Q495X7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.96■■□□□ 1.59
TRIM60Q495X7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
TRIM60Q495X7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.95■■□□□ 1.58
TRIM60Q495X7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.95■■□□□ 1.58
TRIM60Q495X7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM60Q495X7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM60Q495X7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM60Q495X7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM60Q495X7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.95■■□□□ 1.58
TRIM60Q495X7 AC010525.1-201ENST00000585559 441 ntBASIC24.95■■□□□ 1.58
TRIM60Q495X7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.95■■□□□ 1.58
TRIM60Q495X7 AC092803.2-201ENST00000564287 1899 ntBASIC24.95■■□□□ 1.58
TRIM60Q495X7 AC133637.1-201ENST00000624115 1537 ntBASIC24.95■■□□□ 1.58
TRIM60Q495X7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM60Q495X7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM60Q495X7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM60Q495X7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM60Q495X7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM60Q495X7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM60Q495X7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.94■■□□□ 1.58
TRIM60Q495X7 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.94■■□□□ 1.58
TRIM60Q495X7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.94■■□□□ 1.58
TRIM60Q495X7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM60Q495X7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM60Q495X7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM60Q495X7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM60Q495X7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TRIM60Q495X7 RAP2CP1-201ENST00000605103 478 ntBASIC24.93■■□□□ 1.58
TRIM60Q495X7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TRIM60Q495X7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TRIM60Q495X7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
TRIM60Q495X7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.92■■□□□ 1.58
TRIM60Q495X7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.92■■□□□ 1.58
TRIM60Q495X7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.92■■□□□ 1.58
TRIM60Q495X7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM60Q495X7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM60Q495X7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
TRIM60Q495X7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.91■■□□□ 1.58
TRIM60Q495X7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.91■■□□□ 1.58
TRIM60Q495X7 AC006015.1-201ENST00000429970 570 ntBASIC24.91■■□□□ 1.58
TRIM60Q495X7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.91■■□□□ 1.58
TRIM60Q495X7 KRT18P61-201ENST00000585825 1298 ntBASIC24.91■■□□□ 1.58
TRIM60Q495X7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
TRIM60Q495X7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.91■■□□□ 1.58
TRIM60Q495X7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM60Q495X7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM60Q495X7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM60Q495X7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
TRIM60Q495X7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TRIM60Q495X7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM60Q495X7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.9■■□□□ 1.58
TRIM60Q495X7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TRIM60Q495X7 CDCA4P2-201ENST00000441182 718 ntBASIC24.9■■□□□ 1.58
TRIM60Q495X7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM60Q495X7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.9■■□□□ 1.58
TRIM60Q495X7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.9■■□□□ 1.58
TRIM60Q495X7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM60Q495X7 AC091060.1-201ENST00000623524 1766 ntBASIC24.9■■□□□ 1.58
TRIM60Q495X7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.89■■□□□ 1.58
TRIM60Q495X7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.89■■□□□ 1.58
TRIM60Q495X7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.89■■□□□ 1.58
TRIM60Q495X7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.89■■□□□ 1.58
TRIM60Q495X7 AC073111.5-205ENST00000641717 521 ntBASIC24.89■■□□□ 1.58
TRIM60Q495X7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.89■■□□□ 1.57
TRIM60Q495X7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
TRIM60Q495X7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.89■■□□□ 1.57
TRIM60Q495X7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRIM60Q495X7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRIM60Q495X7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.89■■□□□ 1.57
TRIM60Q495X7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM60Q495X7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM60Q495X7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM60Q495X7 ABHD17AP1-201ENST00000358206 933 ntBASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms