Protein–RNA interactions for Protein: Q06159

ATG39, Autophagy-related protein 39, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG39Q06159 MRPL4YLR439W 960 nt3.68□□□□□ -1.82
ATG39Q06159 BUD7YOR299W 2241 nt3.68□□□□□ -1.82
ATG39Q06159 GRS2YPR081C 1857 nt3.68□□□□□ -1.82
ATG39Q06159 RRP3YHR065C 1506 nt3.68□□□□□ -1.82
ATG39Q06159 SKG3YLR187W 3081 nt3.68□□□□□ -1.82
ATG39Q06159 PUT1YLR142W 1431 nt3.68□□□□□ -1.82
ATG39Q06159 TRK1YJL129C 3708 nt3.68□□□□□ -1.82
ATG39Q06159 IBA57YJR122W 1494 nt3.67□□□□□ -1.82
ATG39Q06159 NOP8YOL144W 1455 nt3.67□□□□□ -1.82
ATG39Q06159 RVB1YDR190C 1392 nt3.67□□□□□ -1.82
ATG39Q06159 SWC3YAL011W 1878 nt3.67□□□□□ -1.82
ATG39Q06159 IKS1YJL057C 2004 nt3.67□□□□□ -1.82
ATG39Q06159 YDR274CYDR274C 372 nt3.67□□□□□ -1.82
ATG39Q06159 RRP45YDR280W 918 nt3.67□□□□□ -1.82
ATG39Q06159 SNM1YDR478W 597 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)CtK(CUU)C 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)D1tK(CUU)D1 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)D2tK(CUU)D2 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)E1tK(CUU)E1 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)E2tK(CUU)E2 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)FtK(CUU)F 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)G1tK(CUU)G1 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)G2tK(CUU)G2 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)G3tK(CUU)G3 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)ItK(CUU)I 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)JtK(CUU)J 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)KtK(CUU)K 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)MtK(CUU)M 73 nt3.67□□□□□ -1.82
ATG39Q06159 tK(CUU)PtK(CUU)P 73 nt3.67□□□□□ -1.82
ATG39Q06159 VID28YIL017C 2766 nt3.67□□□□□ -1.82
ATG39Q06159 PUT2YHR037W 1728 nt3.67□□□□□ -1.82
ATG39Q06159 RPP1AYDL081C 321 nt3.66□□□□□ -1.82
ATG39Q06159 RPS13YDR064W 456 nt3.66□□□□□ -1.82
ATG39Q06159 COX4YGL187C 468 nt3.66□□□□□ -1.82
ATG39Q06159 YGR011WYGR011W 327 nt3.66□□□□□ -1.82
ATG39Q06159 CDC42YLR229C 576 nt3.66□□□□□ -1.82
ATG39Q06159 YMR082CYMR082C 357 nt3.66□□□□□ -1.82
ATG39Q06159 YGP1YNL160W 1065 nt3.66□□□□□ -1.82
ATG39Q06159 URE2YNL229C 1065 nt3.66□□□□□ -1.82
ATG39Q06159 YNL296WYNL296W 315 nt3.66□□□□□ -1.82
ATG39Q06159 FEX1YOR390W 1128 nt3.66□□□□□ -1.82
ATG39Q06159 FEX2YPL279C 1128 nt3.66□□□□□ -1.82
ATG39Q06159 BCK2YER167W 2556 nt3.66□□□□□ -1.82
ATG39Q06159 LDB17YDL146W 1476 nt3.66□□□□□ -1.82
ATG39Q06159 tX(XXX)DtX(XXX)D 100 nt3.65□□□□□ -1.83
ATG39Q06159 YIR043CYIR043C 693 nt3.65□□□□□ -1.83
ATG39Q06159 RPL43BYJR094W-A 279 nt3.65□□□□□ -1.83
ATG39Q06159 YAL056C-AYAL056C-A 351 nt3.65□□□□□ -1.83
ATG39Q06159 YLR156WYLR156W 345 nt3.65□□□□□ -1.83
ATG39Q06159 YLR157W-DYLR157W-D 213 nt3.65□□□□□ -1.83
ATG39Q06159 YLR159WYLR159W 345 nt3.65□□□□□ -1.83
ATG39Q06159 YLR161WYLR161W 345 nt3.65□□□□□ -1.83
ATG39Q06159 APS1YLR170C 471 nt3.65□□□□□ -1.83
ATG39Q06159 RSA3YLR221C 663 nt3.65□□□□□ -1.83
ATG39Q06159 YPT53YNL093W 663 nt3.65□□□□□ -1.83
ATG39Q06159 NOP13YNL175C 1212 nt3.65□□□□□ -1.83
ATG39Q06159 CDC14YFR028C 1656 nt3.65□□□□□ -1.83
ATG39Q06159 NUP2YLR335W 2163 nt3.64□□□□□ -1.83
ATG39Q06159 HNT2YDR305C 654 nt3.64□□□□□ -1.83
ATG39Q06159 JAC1YGL018C 555 nt3.64□□□□□ -1.83
ATG39Q06159 YGL088WYGL088W 366 nt3.64□□□□□ -1.83
ATG39Q06159 SUT1YGL162W 900 nt3.64□□□□□ -1.83
ATG39Q06159 CSM2YIL132C 642 nt3.64□□□□□ -1.83
ATG39Q06159 SRP40YKR092C 1221 nt3.64□□□□□ -1.83
ATG39Q06159 YNR042WYNR042W 429 nt3.64□□□□□ -1.83
ATG39Q06159 SAT4YCR008W 1812 nt3.64□□□□□ -1.83
ATG39Q06159 TAF5YBR198C 2397 nt3.64□□□□□ -1.83
ATG39Q06159 ATG2YNL242W 4779 nt3.64□□□□□ -1.83
ATG39Q06159 RAD30YDR419W 1899 nt3.64□□□□□ -1.83
ATG39Q06159 GAL11YOL051W 3246 nt3.63□□□□□ -1.83
ATG39Q06159 RIP1YEL024W 648 nt3.63□□□□□ -1.83
ATG39Q06159 RTA1YGR213C 954 nt3.63□□□□□ -1.83
ATG39Q06159 ADD66YKL206C 804 nt3.63□□□□□ -1.83
ATG39Q06159 YAR019W-AYAR019W-A 333 nt3.63□□□□□ -1.83
ATG39Q06159 YBL006W-AYBL006W-A 150 nt3.63□□□□□ -1.83
ATG39Q06159 MRPL39YML009C 213 nt3.63□□□□□ -1.83
ATG39Q06159 YMR010WYMR010W 1218 nt3.63□□□□□ -1.83
ATG39Q06159 TIP41YPR040W 1071 nt3.63□□□□□ -1.83
ATG39Q06159 YPR109WYPR109W 885 nt3.63□□□□□ -1.83
ATG39Q06159 YPR169W-AYPR169W-A 219 nt3.63□□□□□ -1.83
ATG39Q06159 YPR170W-BYPR170W-B 258 nt3.63□□□□□ -1.83
ATG39Q06159 MAD3YJL013C 1548 nt3.63□□□□□ -1.83
ATG39Q06159 SSH4YKL124W 1740 nt3.62□□□□□ -1.83
ATG39Q06159 RRB1YMR131C 1536 nt3.62□□□□□ -1.83
ATG39Q06159 YFR034W-AYFR034W-A 288 nt3.62□□□□□ -1.83
ATG39Q06159 YIL021C-AYIL021C-A 270 nt3.62□□□□□ -1.83
ATG39Q06159 YRA2YKL214C 612 nt3.62□□□□□ -1.83
ATG39Q06159 TVP38YKR088C 1014 nt3.62□□□□□ -1.83
ATG39Q06159 SLZ1YNL196C 897 nt3.62□□□□□ -1.83
ATG39Q06159 ARG8YOL140W 1272 nt3.62□□□□□ -1.83
ATG39Q06159 YPL191CYPL191C 1083 nt3.62□□□□□ -1.83
ATG39Q06159 DBP3YGL078C 1572 nt3.62□□□□□ -1.83
ATG39Q06159 OMS1YDR316W 1416 nt3.61□□□□□ -1.83
ATG39Q06159 VPS45YGL095C 1734 nt3.61□□□□□ -1.83
ATG39Q06159 ARH1YDR376W 1482 nt3.61□□□□□ -1.83
ATG39Q06159 SUP35YDR172W 2058 nt3.61□□□□□ -1.83
ATG39Q06159 TIP20YGL145W 2106 nt3.61□□□□□ -1.83
ATG39Q06159 YDL027CYDL027C 1263 nt3.61□□□□□ -1.83
ATG39Q06159 YER134CYER134C 537 nt3.61□□□□□ -1.83
ATG39Q06159 SAE3YHR079C-A 276 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms