Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24■■□□□ 1.43
VCPP55072 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24■■□□□ 1.43
VCPP55072 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24■■□□□ 1.43
VCPP55072 MAG-206ENST00000597035 542 ntTSL 4 BASIC24■■□□□ 1.43
VCPP55072 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24■■□□□ 1.43
VCPP55072 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24■■□□□ 1.43
VCPP55072 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24■■□□□ 1.43
VCPP55072 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
VCPP55072 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VCPP55072 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VCPP55072 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
VCPP55072 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.99■■□□□ 1.43
VCPP55072 CA15P2-201ENST00000611168 834 ntBASIC23.99■■□□□ 1.43
VCPP55072 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.99■■□□□ 1.43
VCPP55072 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.99■■□□□ 1.43
VCPP55072 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VCPP55072 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
VCPP55072 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
VCPP55072 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
VCPP55072 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VCPP55072 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.98■■□□□ 1.43
VCPP55072 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VCPP55072 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VCPP55072 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
VCPP55072 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.98■■□□□ 1.43
VCPP55072 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.98■■□□□ 1.43
VCPP55072 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.98■■□□□ 1.43
VCPP55072 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
VCPP55072 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VCPP55072 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VCPP55072 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
VCPP55072 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.97■■□□□ 1.43
VCPP55072 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.97■■□□□ 1.43
VCPP55072 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VCPP55072 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.97■■□□□ 1.43
VCPP55072 SNX5-217ENST00000606557 1087 ntBASIC23.97■■□□□ 1.43
VCPP55072 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
VCPP55072 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
VCPP55072 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
VCPP55072 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VCPP55072 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VCPP55072 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VCPP55072 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VCPP55072 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.95■■□□□ 1.42
VCPP55072 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
VCPP55072 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.95■■□□□ 1.42
VCPP55072 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.95■■□□□ 1.42
VCPP55072 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
VCPP55072 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.95■■□□□ 1.42
VCPP55072 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VCPP55072 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.94■■□□□ 1.42
VCPP55072 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VCPP55072 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VCPP55072 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.94■■□□□ 1.42
VCPP55072 AC004448.1-201ENST00000458332 883 ntBASIC23.94■■□□□ 1.42
VCPP55072 MIR4767-201ENST00000582827 78 ntBASIC23.94■■□□□ 1.42
VCPP55072 MIR6722-201ENST00000617286 78 ntBASIC23.94■■□□□ 1.42
VCPP55072 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
VCPP55072 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.94■■□□□ 1.42
VCPP55072 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
VCPP55072 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VCPP55072 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VCPP55072 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VCPP55072 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VCPP55072 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VCPP55072 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.93■■□□□ 1.42
VCPP55072 AC022517.1-201ENST00000592429 346 ntBASIC23.93■■□□□ 1.42
VCPP55072 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VCPP55072 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VCPP55072 RASA4CP-201ENST00000424092 1398 ntBASIC23.92■■□□□ 1.42
VCPP55072 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VCPP55072 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.92■■□□□ 1.42
VCPP55072 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.92■■□□□ 1.42
VCPP55072 AL137784.2-201ENST00000607332 1000 ntBASIC23.92■■□□□ 1.42
VCPP55072 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
VCPP55072 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.92■■□□□ 1.42
VCPP55072 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VCPP55072 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VCPP55072 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VCPP55072 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VCPP55072 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VCPP55072 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
VCPP55072 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VCPP55072 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VCPP55072 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
VCPP55072 IRS3P-201ENST00000223076 1006 ntBASIC23.9■■□□□ 1.42
VCPP55072 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.9■■□□□ 1.42
VCPP55072 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VCPP55072 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VCPP55072 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VCPP55072 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.9■■□□□ 1.42
VCPP55072 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
VCPP55072 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
VCPP55072 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.89■■□□□ 1.41
VCPP55072 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.89■■□□□ 1.41
VCPP55072 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
VCPP55072 DUX4L19-201ENST00000557448 1267 ntBASIC23.89■■□□□ 1.41
VCPP55072 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.89■■□□□ 1.41
VCPP55072 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.89■■□□□ 1.41
VCPP55072 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms