Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.15■■□□□ 1.62
CPT1AP50416 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.15■■□□□ 1.62
CPT1AP50416 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.15■■□□□ 1.62
CPT1AP50416 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPT1AP50416 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPT1AP50416 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.14■■□□□ 1.62
CPT1AP50416 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPT1AP50416 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.14■■□□□ 1.62
CPT1AP50416 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPT1AP50416 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
CPT1AP50416 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CPT1AP50416 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
CPT1AP50416 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.14■■□□□ 1.61
CPT1AP50416 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPT1AP50416 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.13■■□□□ 1.61
CPT1AP50416 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPT1AP50416 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CPT1AP50416 AL499627.2-201ENST00000606283 725 ntBASIC25.13■■□□□ 1.61
CPT1AP50416 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CPT1AP50416 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CPT1AP50416 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.13■■□□□ 1.61
CPT1AP50416 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CPT1AP50416 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPT1AP50416 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CPT1AP50416 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.12■■□□□ 1.61
CPT1AP50416 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPT1AP50416 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPT1AP50416 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CPT1AP50416 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.12■■□□□ 1.61
CPT1AP50416 AC027612.3-201ENST00000413684 1047 ntBASIC25.12■■□□□ 1.61
CPT1AP50416 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.12■■□□□ 1.61
CPT1AP50416 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.12■■□□□ 1.61
CPT1AP50416 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPT1AP50416 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPT1AP50416 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPT1AP50416 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.12■■□□□ 1.61
CPT1AP50416 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPT1AP50416 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.12■■□□□ 1.61
CPT1AP50416 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CPT1AP50416 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CPT1AP50416 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.11■■□□□ 1.61
CPT1AP50416 MIR572-201ENST00000384983 95 ntBASIC25.11■■□□□ 1.61
CPT1AP50416 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.11■■□□□ 1.61
CPT1AP50416 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CPT1AP50416 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.11■■□□□ 1.61
CPT1AP50416 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CPT1AP50416 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPT1AP50416 AC135731.1-201ENST00000569415 2548 ntBASIC25.11■■□□□ 1.61
CPT1AP50416 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CPT1AP50416 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.11■■□□□ 1.61
CPT1AP50416 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPT1AP50416 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPT1AP50416 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CPT1AP50416 FP325331.1-202ENST00000623531 1380 ntBASIC25.1■■□□□ 1.61
CPT1AP50416 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.61
CPT1AP50416 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPT1AP50416 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPT1AP50416 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CPT1AP50416 AC123595.1-201ENST00000440769 1046 ntBASIC25.1■■□□□ 1.61
CPT1AP50416 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.1■■□□□ 1.61
CPT1AP50416 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPT1AP50416 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.1■■□□□ 1.61
CPT1AP50416 AL031602.1-201ENST00000633169 911 ntBASIC25.1■■□□□ 1.61
CPT1AP50416 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CPT1AP50416 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPT1AP50416 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.09■■□□□ 1.61
CPT1AP50416 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CPT1AP50416 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.09■■□□□ 1.61
CPT1AP50416 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPT1AP50416 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.09■■□□□ 1.61
CPT1AP50416 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.09■■□□□ 1.61
CPT1AP50416 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPT1AP50416 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.09■■□□□ 1.61
CPT1AP50416 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPT1AP50416 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.09■■□□□ 1.61
CPT1AP50416 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPT1AP50416 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.09■■□□□ 1.61
CPT1AP50416 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPT1AP50416 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPT1AP50416 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 KRT18P5-201ENST00000436075 1291 ntBASIC25.08■■□□□ 1.61
CPT1AP50416 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
CPT1AP50416 AC012414.1-201ENST00000556676 535 ntBASIC25.08■■□□□ 1.61
CPT1AP50416 AL354811.1-201ENST00000610286 706 ntBASIC25.08■■□□□ 1.61
CPT1AP50416 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPT1AP50416 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPT1AP50416 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPT1AP50416 OR2I1P-207ENST00000453522 948 ntBASIC25.07■■□□□ 1.6
CPT1AP50416 DUX4L4-201ENST00000566884 1269 ntBASIC25.07■■□□□ 1.6
CPT1AP50416 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPT1AP50416 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.07■■□□□ 1.6
CPT1AP50416 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPT1AP50416 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.07■■□□□ 1.6
CPT1AP50416 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms