Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 CLDN5-201ENST00000403084 2357 ntBASIC20.64■□□□□ 0.89
SLC1A3P43003 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC1A3P43003 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC1A3P43003 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A3P43003 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A3P43003 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC1A3P43003 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A3P43003 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC1A3P43003 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A3P43003 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A3P43003 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC1A3P43003 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A3P43003 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SLC1A3P43003 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A3P43003 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A3P43003 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A3P43003 AC239859.2-201ENST00000444165 318 ntBASIC20.63■□□□□ 0.89
SLC1A3P43003 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A3P43003 AC092028.1-203ENST00000608262 953 ntBASIC20.63■□□□□ 0.89
SLC1A3P43003 MIR6722-201ENST00000617286 78 ntBASIC20.63■□□□□ 0.89
SLC1A3P43003 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC1A3P43003 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A3P43003 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A3P43003 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A3P43003 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A3P43003 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A3P43003 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A3P43003 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A3P43003 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC1A3P43003 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC1A3P43003 MIR4787-201ENST00000607364 84 ntBASIC20.62■□□□□ 0.89
SLC1A3P43003 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A3P43003 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A3P43003 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A3P43003 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A3P43003 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A3P43003 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A3P43003 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A3P43003 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC1A3P43003 ANOS2P-203ENST00000472227 1816 ntBASIC20.61■□□□□ 0.89
SLC1A3P43003 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A3P43003 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC1A3P43003 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A3P43003 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC1A3P43003 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A3P43003 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A3P43003 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A3P43003 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SLC1A3P43003 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A3P43003 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC1A3P43003 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC1A3P43003 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A3P43003 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A3P43003 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A3P43003 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SLC1A3P43003 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A3P43003 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A3P43003 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A3P43003 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SLC1A3P43003 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC1A3P43003 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A3P43003 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLC1A3P43003 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SLC1A3P43003 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A3P43003 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A3P43003 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC1A3P43003 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.58■□□□□ 0.89
SLC1A3P43003 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A3P43003 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.58■□□□□ 0.89
SLC1A3P43003 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A3P43003 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A3P43003 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A3P43003 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC1A3P43003 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A3P43003 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SLC1A3P43003 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A3P43003 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A3P43003 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A3P43003 AC092068.2-201ENST00000590491 1708 ntBASIC20.58■□□□□ 0.88
SLC1A3P43003 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC1A3P43003 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SLC1A3P43003 AC233723.2-201ENST00000623798 2106 ntBASIC20.57■□□□□ 0.88
SLC1A3P43003 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC1A3P43003 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A3P43003 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC1A3P43003 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A3P43003 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC1A3P43003 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms