Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.34■■□□□ 1.01
FEN1P39748 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FEN1P39748 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
FEN1P39748 AC012676.1-201ENST00000574705 1949 ntBASIC21.34■■□□□ 1.01
FEN1P39748 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FEN1P39748 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FEN1P39748 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.34■■□□□ 1.01
FEN1P39748 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.34■■□□□ 1.01
FEN1P39748 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.34■■□□□ 1.01
FEN1P39748 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.34■■□□□ 1.01
FEN1P39748 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
FEN1P39748 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FEN1P39748 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
FEN1P39748 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.33■■□□□ 1.01
FEN1P39748 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
FEN1P39748 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FEN1P39748 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FEN1P39748 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FEN1P39748 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.33■■□□□ 1
FEN1P39748 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FEN1P39748 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
FEN1P39748 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FEN1P39748 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
FEN1P39748 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FEN1P39748 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
FEN1P39748 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
FEN1P39748 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.32■■□□□ 1
FEN1P39748 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.32■■□□□ 1
FEN1P39748 MIR6722-201ENST00000617286 78 ntBASIC21.32■■□□□ 1
FEN1P39748 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FEN1P39748 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
FEN1P39748 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.31■■□□□ 1
FEN1P39748 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
FEN1P39748 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.31■■□□□ 1
FEN1P39748 MTDHP2-201ENST00000601468 714 ntBASIC21.31■■□□□ 1
FEN1P39748 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FEN1P39748 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FEN1P39748 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.31■■□□□ 1
FEN1P39748 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 ANOS2P-203ENST00000472227 1816 ntBASIC21.3■■□□□ 1
FEN1P39748 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.3■■□□□ 1
FEN1P39748 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.3■■□□□ 1
FEN1P39748 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.3■■□□□ 1
FEN1P39748 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FEN1P39748 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FEN1P39748 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
FEN1P39748 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FEN1P39748 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.29■■□□□ 1
FEN1P39748 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.29■■□□□ 1
FEN1P39748 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.29■■□□□ 1
FEN1P39748 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.29■■□□□ 1
FEN1P39748 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FEN1P39748 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
FEN1P39748 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.28■■□□□ 1
FEN1P39748 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FEN1P39748 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FEN1P39748 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.28■■□□□ 1
FEN1P39748 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.28■■□□□ 1
FEN1P39748 DUSP8P5-201ENST00000422884 1815 ntBASIC21.28■■□□□ 1
FEN1P39748 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.28■■□□□ 1
FEN1P39748 AC010997.5-201ENST00000609182 354 ntBASIC21.28■■□□□ 1
FEN1P39748 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
FEN1P39748 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.28■■□□□ 1
FEN1P39748 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.28■■□□□ 1
FEN1P39748 AC005703.6-201ENST00000623265 1329 ntBASIC21.28■■□□□ 1
FEN1P39748 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
FEN1P39748 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
FEN1P39748 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.27■■□□□ 1
FEN1P39748 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FEN1P39748 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.27■■□□□ 1
FEN1P39748 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.27■■□□□ 1
FEN1P39748 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.27■■□□□ 1
FEN1P39748 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.27■□□□□ 0.99
FEN1P39748 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FEN1P39748 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FEN1P39748 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FEN1P39748 UNC93B8-201ENST00000511903 705 ntBASIC21.26■□□□□ 0.99
FEN1P39748 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
FEN1P39748 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FEN1P39748 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FEN1P39748 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.26■□□□□ 0.99
FEN1P39748 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
FEN1P39748 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
FEN1P39748 C9orf163-202ENST00000624034 2573 ntBASIC21.26■□□□□ 0.99
FEN1P39748 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FEN1P39748 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FEN1P39748 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FEN1P39748 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
FEN1P39748 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FEN1P39748 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FEN1P39748 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FEN1P39748 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FEN1P39748 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms