Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SOX11P35716 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX11P35716 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX11P35716 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX11P35716 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX11P35716 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.8■■□□□ 1.08
SOX11P35716 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.8■■□□□ 1.08
SOX11P35716 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX11P35716 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.8■■□□□ 1.08
SOX11P35716 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SOX11P35716 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX11P35716 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX11P35716 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SOX11P35716 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SOX11P35716 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SOX11P35716 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.79■■□□□ 1.08
SOX11P35716 KRT16P3-201ENST00000439127 1283 ntBASIC21.79■■□□□ 1.08
SOX11P35716 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.79■■□□□ 1.08
SOX11P35716 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX11P35716 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX11P35716 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX11P35716 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SOX11P35716 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.79■■□□□ 1.08
SOX11P35716 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX11P35716 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX11P35716 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX11P35716 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX11P35716 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX11P35716 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX11P35716 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SOX11P35716 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX11P35716 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.78■■□□□ 1.08
SOX11P35716 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX11P35716 AC092028.1-203ENST00000608262 953 ntBASIC21.78■■□□□ 1.08
SOX11P35716 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX11P35716 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX11P35716 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SOX11P35716 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SOX11P35716 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX11P35716 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX11P35716 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.77■■□□□ 1.08
SOX11P35716 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX11P35716 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX11P35716 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX11P35716 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.77■■□□□ 1.08
SOX11P35716 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX11P35716 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.77■■□□□ 1.08
SOX11P35716 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SOX11P35716 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SOX11P35716 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
SOX11P35716 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SOX11P35716 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SOX11P35716 PKD1P6-201ENST00000343738 4769 ntBASIC21.76■■□□□ 1.07
SOX11P35716 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX11P35716 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX11P35716 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX11P35716 TSPY9P-201ENST00000440215 945 ntBASIC21.76■■□□□ 1.07
SOX11P35716 TSPY11P-201ENST00000442607 1045 ntBASIC21.76■■□□□ 1.07
SOX11P35716 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SOX11P35716 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.76■■□□□ 1.07
SOX11P35716 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.76■■□□□ 1.07
SOX11P35716 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX11P35716 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX11P35716 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.76■■□□□ 1.07
SOX11P35716 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX11P35716 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX11P35716 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX11P35716 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX11P35716 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SOX11P35716 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.75■■□□□ 1.07
SOX11P35716 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX11P35716 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX11P35716 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX11P35716 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX11P35716 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX11P35716 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SOX11P35716 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SOX11P35716 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
SOX11P35716 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX11P35716 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX11P35716 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX11P35716 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOX11P35716 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX11P35716 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.74■■□□□ 1.07
SOX11P35716 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX11P35716 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX11P35716 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX11P35716 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX11P35716 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX11P35716 CLDN5-201ENST00000403084 2357 ntBASIC21.74■■□□□ 1.07
SOX11P35716 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX11P35716 EP400NL-214ENST00000641289 2402 ntBASIC21.74■■□□□ 1.07
SOX11P35716 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX11P35716 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX11P35716 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SOX11P35716 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SOX11P35716 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.73■■□□□ 1.07
SOX11P35716 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX11P35716 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX11P35716 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms