Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PCK1P35558 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.6■■□□□ 1.37
PCK1P35558 KRT125P-201ENST00000546827 989 ntBASIC23.6■■□□□ 1.37
PCK1P35558 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCK1P35558 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.6■■□□□ 1.37
PCK1P35558 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCK1P35558 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCK1P35558 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PCK1P35558 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.59■■□□□ 1.37
PCK1P35558 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PCK1P35558 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PCK1P35558 AC009299.2-201ENST00000482477 511 ntBASIC23.59■■□□□ 1.37
PCK1P35558 AL451085.2-201ENST00000605085 799 ntBASIC23.59■■□□□ 1.37
PCK1P35558 AC092028.1-203ENST00000608262 953 ntBASIC23.59■■□□□ 1.37
PCK1P35558 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.59■■□□□ 1.37
PCK1P35558 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.59■■□□□ 1.37
PCK1P35558 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.59■■□□□ 1.37
PCK1P35558 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCK1P35558 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCK1P35558 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCK1P35558 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCK1P35558 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCK1P35558 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCK1P35558 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.58■■□□□ 1.37
PCK1P35558 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.58■■□□□ 1.37
PCK1P35558 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCK1P35558 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.58■■□□□ 1.37
PCK1P35558 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCK1P35558 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.58■■□□□ 1.36
PCK1P35558 DUSP8P3-201ENST00000399571 1760 ntBASIC23.57■■□□□ 1.36
PCK1P35558 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCK1P35558 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
PCK1P35558 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.57■■□□□ 1.36
PCK1P35558 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCK1P35558 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.57■■□□□ 1.36
PCK1P35558 AC079834.2-201ENST00000609776 1949 ntBASIC23.57■■□□□ 1.36
PCK1P35558 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.57■■□□□ 1.36
PCK1P35558 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.57■■□□□ 1.36
PCK1P35558 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.57■■□□□ 1.36
PCK1P35558 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCK1P35558 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCK1P35558 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.57■■□□□ 1.36
PCK1P35558 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.57■■□□□ 1.36
PCK1P35558 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCK1P35558 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.57■■□□□ 1.36
PCK1P35558 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCK1P35558 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCK1P35558 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCK1P35558 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.56■■□□□ 1.36
PCK1P35558 MIR4787-201ENST00000607364 84 ntBASIC23.56■■□□□ 1.36
PCK1P35558 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCK1P35558 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCK1P35558 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCK1P35558 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCK1P35558 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PCK1P35558 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
PCK1P35558 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCK1P35558 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCK1P35558 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCK1P35558 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.54■■□□□ 1.36
PCK1P35558 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCK1P35558 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCK1P35558 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCK1P35558 CLDN5-201ENST00000403084 2357 ntBASIC23.54■■□□□ 1.36
PCK1P35558 AC239859.2-201ENST00000444165 318 ntBASIC23.54■■□□□ 1.36
PCK1P35558 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PCK1P35558 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCK1P35558 AC005703.6-201ENST00000623265 1329 ntBASIC23.54■■□□□ 1.36
PCK1P35558 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCK1P35558 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCK1P35558 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCK1P35558 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.53■■□□□ 1.36
PCK1P35558 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.53■■□□□ 1.36
PCK1P35558 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PCK1P35558 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.53■■□□□ 1.36
PCK1P35558 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.53■■□□□ 1.36
PCK1P35558 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCK1P35558 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCK1P35558 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PCK1P35558 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCK1P35558 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
PCK1P35558 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCK1P35558 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCK1P35558 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCK1P35558 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.51■■□□□ 1.35
PCK1P35558 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCK1P35558 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCK1P35558 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
PCK1P35558 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCK1P35558 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCK1P35558 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.51■■□□□ 1.35
PCK1P35558 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCK1P35558 AC068473.5-201ENST00000616428 2072 ntBASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms