Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 NTF6A-201ENST00000591175 560 ntBASIC20.88■□□□□ 0.93
TNFRSF1BP20333 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 AF131216.4-201ENST00000638924 1588 ntBASIC20.88■□□□□ 0.93
TNFRSF1BP20333 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 AC022616.5-201ENST00000518796 181 ntBASIC20.87■□□□□ 0.93
TNFRSF1BP20333 BHLHE23-202ENST00000612929 1109 ntBASIC20.87■□□□□ 0.93
TNFRSF1BP20333 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF1BP20333 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFRSF1BP20333 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 AC004987.1-201ENST00000428627 508 ntBASIC20.85■□□□□ 0.93
TNFRSF1BP20333 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 LINC00526-201ENST00000581067 1875 ntBASIC20.85■□□□□ 0.93
TNFRSF1BP20333 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFRSF1BP20333 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF1BP20333 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF1BP20333 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TNFRSF1BP20333 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF1BP20333 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.84■□□□□ 0.93
TNFRSF1BP20333 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.83■□□□□ 0.93
TNFRSF1BP20333 MIR4281-201ENST00000580852 62 ntBASIC20.83■□□□□ 0.93
TNFRSF1BP20333 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF1BP20333 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF1BP20333 ATP5G2P3-201ENST00000429083 425 ntBASIC20.82■□□□□ 0.92
TNFRSF1BP20333 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFRSF1BP20333 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.82■□□□□ 0.92
TNFRSF1BP20333 AC010980.1-201ENST00000587192 1142 ntBASIC20.82■□□□□ 0.92
TNFRSF1BP20333 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF1BP20333 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF1BP20333 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF1BP20333 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF1BP20333 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 THA1P-201ENST00000590384 1145 ntBASIC20.8■□□□□ 0.92
TNFRSF1BP20333 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms