Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.46■■■□□ 2.63
ATF3P18847 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ATF3P18847 AL355802.2-201ENST00000402069 882 ntBASIC31.46■■■□□ 2.63
ATF3P18847 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.46■■■□□ 2.63
ATF3P18847 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC31.46■■■□□ 2.63
ATF3P18847 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.46■■■□□ 2.63
ATF3P18847 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ATF3P18847 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ATF3P18847 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.45■■■□□ 2.63
ATF3P18847 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.45■■■□□ 2.63
ATF3P18847 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.45■■■□□ 2.63
ATF3P18847 AC091060.1-201ENST00000623524 1766 ntBASIC31.45■■■□□ 2.62
ATF3P18847 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.45■■■□□ 2.62
ATF3P18847 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.44■■■□□ 2.62
ATF3P18847 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
ATF3P18847 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ATF3P18847 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ATF3P18847 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.44■■■□□ 2.62
ATF3P18847 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC31.44■■■□□ 2.62
ATF3P18847 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
ATF3P18847 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ATF3P18847 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ATF3P18847 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ATF3P18847 AC010525.1-201ENST00000585559 441 ntBASIC31.43■■■□□ 2.62
ATF3P18847 MIR6089-201ENST00000616698 64 ntBASIC31.43■■■□□ 2.62
ATF3P18847 AL109923.1-201ENST00000618799 583 ntBASIC31.43■■■□□ 2.62
ATF3P18847 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.43■■■□□ 2.62
ATF3P18847 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ATF3P18847 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
ATF3P18847 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ATF3P18847 AP005435.1-201ENST00000529293 1178 ntBASIC31.42■■■□□ 2.62
ATF3P18847 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.42■■■□□ 2.62
ATF3P18847 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ATF3P18847 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ATF3P18847 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
ATF3P18847 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
ATF3P18847 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
ATF3P18847 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
ATF3P18847 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
ATF3P18847 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.41■■■□□ 2.62
ATF3P18847 AC006970.2-201ENST00000450065 779 ntBASIC31.41■■■□□ 2.62
ATF3P18847 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC31.41■■■□□ 2.62
ATF3P18847 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ATF3P18847 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC31.41■■■□□ 2.62
ATF3P18847 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
ATF3P18847 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
ATF3P18847 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
ATF3P18847 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.4■■■□□ 2.62
ATF3P18847 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.4■■■□□ 2.62
ATF3P18847 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
ATF3P18847 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.39■■■□□ 2.62
ATF3P18847 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
ATF3P18847 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.39■■■□□ 2.62
ATF3P18847 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.39■■■□□ 2.62
ATF3P18847 AC105233.4-201ENST00000642045 216 ntBASIC31.39■■■□□ 2.62
ATF3P18847 SLC6A10P-202ENST00000431994 2058 ntBASIC31.39■■■□□ 2.62
ATF3P18847 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.61
ATF3P18847 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.39■■■□□ 2.61
ATF3P18847 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ATF3P18847 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC31.38■■■□□ 2.61
ATF3P18847 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.38■■■□□ 2.61
ATF3P18847 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ATF3P18847 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.38■■■□□ 2.61
ATF3P18847 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
ATF3P18847 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.37■■■□□ 2.61
ATF3P18847 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.37■■■□□ 2.61
ATF3P18847 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ATF3P18847 BID-214ENST00000617586 542 ntTSL 5 BASIC31.37■■■□□ 2.61
ATF3P18847 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
ATF3P18847 AC066615.1-201ENST00000640911 628 ntBASIC31.37■■■□□ 2.61
ATF3P18847 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
ATF3P18847 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.37■■■□□ 2.61
ATF3P18847 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
ATF3P18847 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
ATF3P18847 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
ATF3P18847 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC31.36■■■□□ 2.61
ATF3P18847 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATF3P18847 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATF3P18847 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATF3P18847 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.36■■■□□ 2.61
ATF3P18847 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ATF3P18847 CROCCP5-201ENST00000436658 830 ntBASIC31.36■■■□□ 2.61
ATF3P18847 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.36■■■□□ 2.61
ATF3P18847 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.36■■■□□ 2.61
ATF3P18847 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.36■■■□□ 2.61
ATF3P18847 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
ATF3P18847 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
ATF3P18847 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.35■■■□□ 2.61
ATF3P18847 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.35■■■□□ 2.61
ATF3P18847 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
ATF3P18847 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
ATF3P18847 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ATF3P18847 OR2I1P-207ENST00000453522 948 ntBASIC31.35■■■□□ 2.61
ATF3P18847 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.35■■■□□ 2.61
ATF3P18847 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.35■■■□□ 2.61
ATF3P18847 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.35■■■□□ 2.61
ATF3P18847 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ATF3P18847 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ATF3P18847 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ATF3P18847 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms