Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
HOXC6P09630 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.69■■□□□ 1.7
HOXC6P09630 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
HOXC6P09630 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
HOXC6P09630 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HOXC6P09630 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
HOXC6P09630 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.68■■□□□ 1.7
HOXC6P09630 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
HOXC6P09630 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.68■■□□□ 1.7
HOXC6P09630 HLA-L-211ENST00000482052 1765 ntBASIC25.68■■□□□ 1.7
HOXC6P09630 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
HOXC6P09630 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.68■■□□□ 1.7
HOXC6P09630 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HOXC6P09630 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HOXC6P09630 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HOXC6P09630 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HOXC6P09630 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.67■■□□□ 1.7
HOXC6P09630 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HOXC6P09630 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HOXC6P09630 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HOXC6P09630 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HOXC6P09630 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.66■■□□□ 1.7
HOXC6P09630 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.66■■□□□ 1.7
HOXC6P09630 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HOXC6P09630 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.66■■□□□ 1.7
HOXC6P09630 AL354811.1-201ENST00000610286 706 ntBASIC25.66■■□□□ 1.7
HOXC6P09630 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
HOXC6P09630 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.66■■□□□ 1.7
HOXC6P09630 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.66■■□□□ 1.7
HOXC6P09630 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HOXC6P09630 AC012414.1-201ENST00000556676 535 ntBASIC25.65■■□□□ 1.7
HOXC6P09630 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.65■■□□□ 1.7
HOXC6P09630 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
HOXC6P09630 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.65■■□□□ 1.7
HOXC6P09630 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HOXC6P09630 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
HOXC6P09630 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
HOXC6P09630 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
HOXC6P09630 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.64■■□□□ 1.7
HOXC6P09630 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.64■■□□□ 1.7
HOXC6P09630 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
HOXC6P09630 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.64■■□□□ 1.7
HOXC6P09630 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HOXC6P09630 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.63■■□□□ 1.69
HOXC6P09630 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.63■■□□□ 1.69
HOXC6P09630 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HOXC6P09630 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.63■■□□□ 1.69
HOXC6P09630 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HOXC6P09630 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
HOXC6P09630 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
HOXC6P09630 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.63■■□□□ 1.69
HOXC6P09630 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HOXC6P09630 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HOXC6P09630 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.62■■□□□ 1.69
HOXC6P09630 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.62■■□□□ 1.69
HOXC6P09630 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HOXC6P09630 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.62■■□□□ 1.69
HOXC6P09630 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.62■■□□□ 1.69
HOXC6P09630 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HOXC6P09630 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HOXC6P09630 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HOXC6P09630 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.61■■□□□ 1.69
HOXC6P09630 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.61■■□□□ 1.69
HOXC6P09630 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
HOXC6P09630 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.61■■□□□ 1.69
HOXC6P09630 CCDC92B-201ENST00000575506 885 ntBASIC25.61■■□□□ 1.69
HOXC6P09630 AL499627.2-201ENST00000606283 725 ntBASIC25.61■■□□□ 1.69
HOXC6P09630 MIR6084-201ENST00000622012 110 ntBASIC25.61■■□□□ 1.69
HOXC6P09630 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
HOXC6P09630 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
HOXC6P09630 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.61■■□□□ 1.69
HOXC6P09630 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HOXC6P09630 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
HOXC6P09630 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.6■■□□□ 1.69
HOXC6P09630 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HOXC6P09630 AC133637.1-201ENST00000624115 1537 ntBASIC25.6■■□□□ 1.69
HOXC6P09630 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
HOXC6P09630 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.6■■□□□ 1.69
HOXC6P09630 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.6■■□□□ 1.69
HOXC6P09630 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
HOXC6P09630 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HOXC6P09630 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
HOXC6P09630 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HOXC6P09630 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HOXC6P09630 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HOXC6P09630 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.59■■□□□ 1.69
HOXC6P09630 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HOXC6P09630 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HOXC6P09630 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.59■■□□□ 1.69
HOXC6P09630 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HOXC6P09630 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HOXC6P09630 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.59■■□□□ 1.69
HOXC6P09630 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
HOXC6P09630 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HOXC6P09630 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.58■■□□□ 1.69
HOXC6P09630 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
HOXC6P09630 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HOXC6P09630 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HOXC6P09630 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.68
HOXC6P09630 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms