Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ATP5G2P3-201ENST00000429083 425 ntBASIC20.97■□□□□ 0.95
OPN1SWP03999 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPN1SWP03999 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.97■□□□□ 0.95
OPN1SWP03999 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.97■□□□□ 0.95
OPN1SWP03999 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPN1SWP03999 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.97■□□□□ 0.95
OPN1SWP03999 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPN1SWP03999 AC079630.1-202ENST00000618127 1840 ntBASIC20.97■□□□□ 0.95
OPN1SWP03999 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 GUSBP5-202ENST00000510805 1989 ntBASIC20.96■□□□□ 0.95
OPN1SWP03999 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
OPN1SWP03999 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.96■□□□□ 0.95
OPN1SWP03999 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 MIR4281-201ENST00000580852 62 ntBASIC20.96■□□□□ 0.95
OPN1SWP03999 AC010980.1-201ENST00000587192 1142 ntBASIC20.96■□□□□ 0.95
OPN1SWP03999 THA1P-201ENST00000590384 1145 ntBASIC20.96■□□□□ 0.95
OPN1SWP03999 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
OPN1SWP03999 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.96■□□□□ 0.95
OPN1SWP03999 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.96■□□□□ 0.95
OPN1SWP03999 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
OPN1SWP03999 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
OPN1SWP03999 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.95■□□□□ 0.94
OPN1SWP03999 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
OPN1SWP03999 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPN1SWP03999 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPN1SWP03999 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.94■□□□□ 0.94
OPN1SWP03999 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 LINC00565-201ENST00000562710 2331 ntBASIC20.94■□□□□ 0.94
OPN1SWP03999 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
OPN1SWP03999 CLDN5-201ENST00000403084 2357 ntBASIC20.94■□□□□ 0.94
OPN1SWP03999 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
OPN1SWP03999 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
OPN1SWP03999 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.94■□□□□ 0.94
OPN1SWP03999 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
OPN1SWP03999 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPN1SWP03999 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPN1SWP03999 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.93■□□□□ 0.94
OPN1SWP03999 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPN1SWP03999 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPN1SWP03999 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.93■□□□□ 0.94
OPN1SWP03999 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.93■□□□□ 0.94
OPN1SWP03999 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
OPN1SWP03999 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OPN1SWP03999 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.92■□□□□ 0.94
OPN1SWP03999 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.92■□□□□ 0.94
OPN1SWP03999 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.92■□□□□ 0.94
OPN1SWP03999 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.92■□□□□ 0.94
OPN1SWP03999 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OPN1SWP03999 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
OPN1SWP03999 KRT18P24-201ENST00000344739 1156 ntBASIC20.91■□□□□ 0.94
OPN1SWP03999 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPN1SWP03999 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPN1SWP03999 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPN1SWP03999 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.91■□□□□ 0.94
OPN1SWP03999 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
OPN1SWP03999 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPN1SWP03999 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OPN1SWP03999 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OPN1SWP03999 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OPN1SWP03999 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.9■□□□□ 0.94
OPN1SWP03999 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPN1SWP03999 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPN1SWP03999 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OPN1SWP03999 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.9■□□□□ 0.94
OPN1SWP03999 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OPN1SWP03999 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
OPN1SWP03999 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPN1SWP03999 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OPN1SWP03999 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
OPN1SWP03999 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
OPN1SWP03999 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
OPN1SWP03999 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
OPN1SWP03999 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
OPN1SWP03999 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
OPN1SWP03999 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPN1SWP03999 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPN1SWP03999 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPN1SWP03999 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
OPN1SWP03999 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPN1SWP03999 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.89■□□□□ 0.93
OPN1SWP03999 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OPN1SWP03999 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
OPN1SWP03999 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
OPN1SWP03999 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
OPN1SWP03999 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
OPN1SWP03999 TSPY13P-201ENST00000338964 914 ntBASIC20.88■□□□□ 0.93
OPN1SWP03999 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.88■□□□□ 0.93
OPN1SWP03999 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.88■□□□□ 0.93
OPN1SWP03999 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms