Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.54
CHRNA1P02708 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHRNA1P02708 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHRNA1P02708 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHRNA1P02708 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.69■■□□□ 1.54
CHRNA1P02708 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.69■■□□□ 1.54
CHRNA1P02708 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHRNA1P02708 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
CHRNA1P02708 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHRNA1P02708 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHRNA1P02708 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHRNA1P02708 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHRNA1P02708 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.68■■□□□ 1.54
CHRNA1P02708 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CHRNA1P02708 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHRNA1P02708 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHRNA1P02708 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.68■■□□□ 1.54
CHRNA1P02708 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CHRNA1P02708 AC138932.3-201ENST00000567634 1902 ntBASIC24.68■■□□□ 1.54
CHRNA1P02708 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CHRNA1P02708 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.68■■□□□ 1.54
CHRNA1P02708 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHRNA1P02708 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHRNA1P02708 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHRNA1P02708 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.67■■□□□ 1.54
CHRNA1P02708 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.67■■□□□ 1.54
CHRNA1P02708 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.67■■□□□ 1.54
CHRNA1P02708 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.67■■□□□ 1.54
CHRNA1P02708 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CHRNA1P02708 AC133637.1-201ENST00000624115 1537 ntBASIC24.66■■□□□ 1.54
CHRNA1P02708 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.66■■□□□ 1.54
CHRNA1P02708 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.66■■□□□ 1.54
CHRNA1P02708 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CHRNA1P02708 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHRNA1P02708 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHRNA1P02708 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.65■■□□□ 1.54
CHRNA1P02708 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CHRNA1P02708 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CHRNA1P02708 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.65■■□□□ 1.54
CHRNA1P02708 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHRNA1P02708 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHRNA1P02708 AL499627.2-201ENST00000606283 725 ntBASIC24.65■■□□□ 1.54
CHRNA1P02708 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.65■■□□□ 1.54
CHRNA1P02708 AL031602.1-201ENST00000633169 911 ntBASIC24.65■■□□□ 1.54
CHRNA1P02708 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.65■■□□□ 1.54
CHRNA1P02708 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.65■■□□□ 1.54
CHRNA1P02708 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHRNA1P02708 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.64■■□□□ 1.54
CHRNA1P02708 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.64■■□□□ 1.54
CHRNA1P02708 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHRNA1P02708 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.64■■□□□ 1.54
CHRNA1P02708 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHRNA1P02708 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.64■■□□□ 1.53
CHRNA1P02708 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHRNA1P02708 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.63■■□□□ 1.53
CHRNA1P02708 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHRNA1P02708 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHRNA1P02708 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.63■■□□□ 1.53
CHRNA1P02708 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.63■■□□□ 1.53
CHRNA1P02708 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHRNA1P02708 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHRNA1P02708 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHRNA1P02708 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHRNA1P02708 YBX1P1-201ENST00000445822 960 ntBASIC24.62■■□□□ 1.53
CHRNA1P02708 IGHV3-19-201ENST00000521488 291 ntBASIC24.62■■□□□ 1.53
CHRNA1P02708 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHRNA1P02708 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHRNA1P02708 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHRNA1P02708 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CHRNA1P02708 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.62■■□□□ 1.53
CHRNA1P02708 AC142381.3-201ENST00000568208 1670 ntBASIC24.62■■□□□ 1.53
CHRNA1P02708 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
CHRNA1P02708 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHRNA1P02708 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHRNA1P02708 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHRNA1P02708 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.61■■□□□ 1.53
CHRNA1P02708 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CHRNA1P02708 AC034268.1-201ENST00000441047 882 ntBASIC24.61■■□□□ 1.53
CHRNA1P02708 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.61■■□□□ 1.53
CHRNA1P02708 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.61■■□□□ 1.53
CHRNA1P02708 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHRNA1P02708 AC010525.1-201ENST00000585559 441 ntBASIC24.61■■□□□ 1.53
CHRNA1P02708 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.61■■□□□ 1.53
CHRNA1P02708 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHRNA1P02708 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHRNA1P02708 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.61■■□□□ 1.53
CHRNA1P02708 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHRNA1P02708 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CHRNA1P02708 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms