Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TOMM40O96008 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.54■□□□□ 0.4
TOMM40O96008 PVT1_1.1-201ENST00000615125 194 ntBASIC17.54■□□□□ 0.4
TOMM40O96008 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.54■□□□□ 0.4
TOMM40O96008 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.54■□□□□ 0.4
TOMM40O96008 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.54■□□□□ 0.4
TOMM40O96008 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.54■□□□□ 0.4
TOMM40O96008 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
TOMM40O96008 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TOMM40O96008 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOMM40O96008 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOMM40O96008 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.53■□□□□ 0.4
TOMM40O96008 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOMM40O96008 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TOMM40O96008 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.53■□□□□ 0.4
TOMM40O96008 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.53■□□□□ 0.4
TOMM40O96008 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.53■□□□□ 0.4
TOMM40O96008 AC010980.1-201ENST00000587192 1142 ntBASIC17.53■□□□□ 0.4
TOMM40O96008 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TOMM40O96008 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TOMM40O96008 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOMM40O96008 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOMM40O96008 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TOMM40O96008 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TOMM40O96008 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOMM40O96008 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.53■□□□□ 0.4
TOMM40O96008 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOMM40O96008 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TOMM40O96008 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOMM40O96008 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOMM40O96008 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOMM40O96008 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.52■□□□□ 0.4
TOMM40O96008 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.52■□□□□ 0.4
TOMM40O96008 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.52■□□□□ 0.4
TOMM40O96008 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOMM40O96008 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOMM40O96008 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOMM40O96008 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
TOMM40O96008 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOMM40O96008 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOMM40O96008 AC233723.2-201ENST00000623798 2106 ntBASIC17.51■□□□□ 0.39
TOMM40O96008 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.51■□□□□ 0.39
TOMM40O96008 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOMM40O96008 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TOMM40O96008 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOMM40O96008 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOMM40O96008 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.51■□□□□ 0.39
TOMM40O96008 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.51■□□□□ 0.39
TOMM40O96008 AC004448.1-201ENST00000458332 883 ntBASIC17.51■□□□□ 0.39
TOMM40O96008 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.51■□□□□ 0.39
TOMM40O96008 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TOMM40O96008 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TOMM40O96008 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.51■□□□□ 0.39
TOMM40O96008 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.51■□□□□ 0.39
TOMM40O96008 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TOMM40O96008 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOMM40O96008 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.5■□□□□ 0.39
TOMM40O96008 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOMM40O96008 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.5■□□□□ 0.39
TOMM40O96008 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOMM40O96008 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOMM40O96008 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOMM40O96008 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.5■□□□□ 0.39
TOMM40O96008 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOMM40O96008 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOMM40O96008 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOMM40O96008 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOMM40O96008 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOMM40O96008 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.49■□□□□ 0.39
TOMM40O96008 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.49■□□□□ 0.39
TOMM40O96008 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.49■□□□□ 0.39
TOMM40O96008 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.49■□□□□ 0.39
TOMM40O96008 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOMM40O96008 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TOMM40O96008 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TOMM40O96008 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOMM40O96008 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.48■□□□□ 0.39
TOMM40O96008 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TOMM40O96008 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.48■□□□□ 0.39
TOMM40O96008 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOMM40O96008 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOMM40O96008 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.48■□□□□ 0.39
TOMM40O96008 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOMM40O96008 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.48■□□□□ 0.39
TOMM40O96008 MIR4508-201ENST00000584178 70 ntBASIC17.48■□□□□ 0.39
TOMM40O96008 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.48■□□□□ 0.39
TOMM40O96008 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOMM40O96008 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOMM40O96008 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOMM40O96008 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOMM40O96008 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms