Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX2-2O95096 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX2-2O95096 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NKX2-2O95096 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-2O95096 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NKX2-2O95096 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NKX2-2O95096 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-2O95096 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-2O95096 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.83■□□□□ 0.93
NKX2-2O95096 KRT16P3-201ENST00000439127 1283 ntBASIC20.83■□□□□ 0.93
NKX2-2O95096 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-2O95096 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-2O95096 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NKX2-2O95096 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NKX2-2O95096 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
NKX2-2O95096 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.82■□□□□ 0.92
NKX2-2O95096 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-2O95096 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NKX2-2O95096 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-2O95096 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.82■□□□□ 0.92
NKX2-2O95096 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.82■□□□□ 0.92
NKX2-2O95096 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.82■□□□□ 0.92
NKX2-2O95096 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NKX2-2O95096 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
NKX2-2O95096 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.81■□□□□ 0.92
NKX2-2O95096 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 AC144652.1-201ENST00000609974 1624 ntBASIC20.81■□□□□ 0.92
NKX2-2O95096 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-2O95096 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.8■□□□□ 0.92
NKX2-2O95096 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-2O95096 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX2-2O95096 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NKX2-2O95096 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-2O95096 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-2O95096 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.8■□□□□ 0.92
NKX2-2O95096 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.8■□□□□ 0.92
NKX2-2O95096 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-2O95096 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX2-2O95096 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.79■□□□□ 0.92
NKX2-2O95096 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-2O95096 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NKX2-2O95096 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NKX2-2O95096 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-2O95096 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-2O95096 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-2O95096 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-2O95096 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-2O95096 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-2O95096 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.79■□□□□ 0.92
NKX2-2O95096 AC009102.2-201ENST00000606772 1639 ntBASIC20.78■□□□□ 0.92
NKX2-2O95096 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-2O95096 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-2O95096 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.78■□□□□ 0.92
NKX2-2O95096 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-2O95096 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.78■□□□□ 0.92
NKX2-2O95096 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-2O95096 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-2O95096 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX2-2O95096 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-2O95096 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-2O95096 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX2-2O95096 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.77■□□□□ 0.92
NKX2-2O95096 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-2O95096 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-2O95096 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-2O95096 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-2O95096 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-2O95096 AL353803.4-201ENST00000565882 1934 ntBASIC20.76■□□□□ 0.91
NKX2-2O95096 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-2O95096 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.76■□□□□ 0.91
NKX2-2O95096 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.76■□□□□ 0.91
NKX2-2O95096 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.76■□□□□ 0.91
NKX2-2O95096 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.76■□□□□ 0.91
NKX2-2O95096 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.76■□□□□ 0.91
NKX2-2O95096 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.76■□□□□ 0.91
NKX2-2O95096 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-2O95096 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.76■□□□□ 0.91
NKX2-2O95096 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-2O95096 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-2O95096 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-2O95096 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
NKX2-2O95096 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX2-2O95096 FP325331.1-202ENST00000623531 1380 ntBASIC20.75■□□□□ 0.91
NKX2-2O95096 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-2O95096 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-2O95096 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-2O95096 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-2O95096 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NKX2-2O95096 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NKX2-2O95096 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-2O95096 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-2O95096 AC068473.5-201ENST00000616428 2072 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms