Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLPXO76031 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLPXO76031 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
CLPXO76031 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLPXO76031 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPXO76031 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLPXO76031 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLPXO76031 RNF126P1-201ENST00000567452 1320 ntBASIC20.33■□□□□ 0.85
CLPXO76031 RNF165-205ENST00000588679 2904 ntBASIC20.33■□□□□ 0.85
CLPXO76031 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLPXO76031 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.33■□□□□ 0.85
CLPXO76031 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLPXO76031 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLPXO76031 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CLPXO76031 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLPXO76031 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLPXO76031 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLPXO76031 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLPXO76031 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLPXO76031 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLPXO76031 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLPXO76031 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.32■□□□□ 0.84
CLPXO76031 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.32■□□□□ 0.84
CLPXO76031 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CLPXO76031 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.32■□□□□ 0.84
CLPXO76031 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLPXO76031 FBXW4P1-201ENST00000426721 2239 ntBASIC20.31■□□□□ 0.84
CLPXO76031 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLPXO76031 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.31■□□□□ 0.84
CLPXO76031 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLPXO76031 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.31■□□□□ 0.84
CLPXO76031 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.31■□□□□ 0.84
CLPXO76031 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLPXO76031 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.31■□□□□ 0.84
CLPXO76031 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.3■□□□□ 0.84
CLPXO76031 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLPXO76031 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLPXO76031 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLPXO76031 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.3■□□□□ 0.84
CLPXO76031 ESRRAP2-201ENST00000418437 1549 ntBASIC20.3■□□□□ 0.84
CLPXO76031 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLPXO76031 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
CLPXO76031 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLPXO76031 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.3■□□□□ 0.84
CLPXO76031 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLPXO76031 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.3■□□□□ 0.84
CLPXO76031 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLPXO76031 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLPXO76031 C11orf96-202ENST00000528572 1834 ntBASIC20.3■□□□□ 0.84
CLPXO76031 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLPXO76031 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLPXO76031 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.29■□□□□ 0.84
CLPXO76031 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLPXO76031 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLPXO76031 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.29■□□□□ 0.84
CLPXO76031 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.29■□□□□ 0.84
CLPXO76031 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLPXO76031 AL359504.2-201ENST00000605506 1601 ntBASIC20.28■□□□□ 0.84
CLPXO76031 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.28■□□□□ 0.84
CLPXO76031 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.28■□□□□ 0.84
CLPXO76031 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLPXO76031 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLPXO76031 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLPXO76031 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.27■□□□□ 0.84
CLPXO76031 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPXO76031 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLPXO76031 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLPXO76031 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CLPXO76031 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms