Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.28■■■□□ 2.6
BRD4O60885 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
BRD4O60885 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.27■■■□□ 2.6
BRD4O60885 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
BRD4O60885 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.27■■■□□ 2.6
BRD4O60885 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.27■■■□□ 2.6
BRD4O60885 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
BRD4O60885 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
BRD4O60885 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
BRD4O60885 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
BRD4O60885 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
BRD4O60885 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
BRD4O60885 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.26■■■□□ 2.59
BRD4O60885 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.26■■■□□ 2.59
BRD4O60885 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.26■■■□□ 2.59
BRD4O60885 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.26■■■□□ 2.59
BRD4O60885 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
BRD4O60885 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
BRD4O60885 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
BRD4O60885 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
BRD4O60885 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
BRD4O60885 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.25■■■□□ 2.59
BRD4O60885 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.25■■■□□ 2.59
BRD4O60885 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.25■■■□□ 2.59
BRD4O60885 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
BRD4O60885 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
BRD4O60885 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.25■■■□□ 2.59
BRD4O60885 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
BRD4O60885 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.24■■■□□ 2.59
BRD4O60885 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
BRD4O60885 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
BRD4O60885 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.23■■■□□ 2.59
BRD4O60885 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 AC099791.1-201ENST00000416440 715 ntBASIC31.23■■■□□ 2.59
BRD4O60885 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.23■■■□□ 2.59
BRD4O60885 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC31.23■■■□□ 2.59
BRD4O60885 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
BRD4O60885 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
BRD4O60885 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
BRD4O60885 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BRD4O60885 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.22■■■□□ 2.59
BRD4O60885 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BRD4O60885 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
BRD4O60885 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
BRD4O60885 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
BRD4O60885 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
BRD4O60885 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
BRD4O60885 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
BRD4O60885 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BRD4O60885 IRS3P-201ENST00000223076 1006 ntBASIC31.21■■■□□ 2.59
BRD4O60885 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BRD4O60885 BX842568.3-201ENST00000418104 571 ntBASIC31.21■■■□□ 2.59
BRD4O60885 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
BRD4O60885 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BRD4O60885 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
BRD4O60885 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
BRD4O60885 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC31.21■■■□□ 2.59
BRD4O60885 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.21■■■□□ 2.59
BRD4O60885 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
BRD4O60885 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
BRD4O60885 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
BRD4O60885 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
BRD4O60885 AC008764.7-201ENST00000593779 1081 ntBASIC31.19■■■□□ 2.58
BRD4O60885 AC087623.3-201ENST00000607047 1098 ntBASIC31.19■■■□□ 2.58
BRD4O60885 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
BRD4O60885 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
BRD4O60885 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
BRD4O60885 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.18■■■□□ 2.58
BRD4O60885 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.18■■■□□ 2.58
BRD4O60885 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 AC006455.2-201ENST00000429931 906 ntBASIC31.18■■■□□ 2.58
BRD4O60885 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
BRD4O60885 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.18■■■□□ 2.58
BRD4O60885 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.18■■■□□ 2.58
BRD4O60885 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BRD4O60885 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.18■■■□□ 2.58
BRD4O60885 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.17■■■□□ 2.58
BRD4O60885 AC233992.3-201ENST00000607491 485 ntBASIC31.17■■■□□ 2.58
BRD4O60885 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BRD4O60885 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BRD4O60885 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
BRD4O60885 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
BRD4O60885 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.17■■■□□ 2.58
BRD4O60885 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.17■■■□□ 2.58
BRD4O60885 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.17■■■□□ 2.58
BRD4O60885 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.17■■■□□ 2.58
BRD4O60885 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms