Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
GMDSO60547 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.77■□□□□ 0.76
GMDSO60547 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GMDSO60547 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GMDSO60547 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
GMDSO60547 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.77■□□□□ 0.76
GMDSO60547 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GMDSO60547 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GMDSO60547 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GMDSO60547 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.77■□□□□ 0.76
GMDSO60547 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GMDSO60547 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.77■□□□□ 0.76
GMDSO60547 AL161729.1-201ENST00000604104 1402 ntBASIC19.76■□□□□ 0.75
GMDSO60547 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
GMDSO60547 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GMDSO60547 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GMDSO60547 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.75■□□□□ 0.75
GMDSO60547 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GMDSO60547 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.75■□□□□ 0.75
GMDSO60547 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.75■□□□□ 0.75
GMDSO60547 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GMDSO60547 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.75■□□□□ 0.75
GMDSO60547 MIR4281-201ENST00000580852 62 ntBASIC19.75■□□□□ 0.75
GMDSO60547 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.75■□□□□ 0.75
GMDSO60547 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
GMDSO60547 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.75■□□□□ 0.75
GMDSO60547 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GMDSO60547 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GMDSO60547 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.75■□□□□ 0.75
GMDSO60547 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
GMDSO60547 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GMDSO60547 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
GMDSO60547 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.74■□□□□ 0.75
GMDSO60547 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.74■□□□□ 0.75
GMDSO60547 AL031848.2-201ENST00000607670 837 ntBASIC19.74■□□□□ 0.75
GMDSO60547 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.74■□□□□ 0.75
GMDSO60547 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GMDSO60547 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.73■□□□□ 0.75
GMDSO60547 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GMDSO60547 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GMDSO60547 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GMDSO60547 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.73■□□□□ 0.75
GMDSO60547 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GMDSO60547 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
GMDSO60547 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GMDSO60547 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GMDSO60547 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GMDSO60547 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GMDSO60547 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.72■□□□□ 0.75
GMDSO60547 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GMDSO60547 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
GMDSO60547 AL022069.1-201ENST00000568025 1636 ntBASIC19.72■□□□□ 0.75
GMDSO60547 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GMDSO60547 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GMDSO60547 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GMDSO60547 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.71■□□□□ 0.75
GMDSO60547 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GMDSO60547 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GMDSO60547 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GMDSO60547 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.71■□□□□ 0.75
GMDSO60547 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GMDSO60547 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GMDSO60547 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GMDSO60547 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GMDSO60547 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GMDSO60547 C1orf229-201ENST00000623686 2258 ntBASIC19.71■□□□□ 0.75
GMDSO60547 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GMDSO60547 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.7■□□□□ 0.74
GMDSO60547 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GMDSO60547 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.7■□□□□ 0.74
GMDSO60547 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.7■□□□□ 0.74
GMDSO60547 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms