Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
IDH3BO43837 AC092068.2-201ENST00000590491 1708 ntBASIC20.5■□□□□ 0.87
IDH3BO43837 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
IDH3BO43837 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
IDH3BO43837 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
IDH3BO43837 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
IDH3BO43837 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.49■□□□□ 0.87
IDH3BO43837 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.49■□□□□ 0.87
IDH3BO43837 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
IDH3BO43837 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.49■□□□□ 0.87
IDH3BO43837 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IDH3BO43837 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.49■□□□□ 0.87
IDH3BO43837 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IDH3BO43837 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
IDH3BO43837 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IDH3BO43837 AC139795.1-202ENST00000500444 432 ntBASIC20.48■□□□□ 0.87
IDH3BO43837 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IDH3BO43837 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IDH3BO43837 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.48■□□□□ 0.87
IDH3BO43837 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
IDH3BO43837 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IDH3BO43837 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.48■□□□□ 0.87
IDH3BO43837 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
IDH3BO43837 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.47■□□□□ 0.87
IDH3BO43837 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.47■□□□□ 0.87
IDH3BO43837 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
IDH3BO43837 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
IDH3BO43837 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
IDH3BO43837 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IDH3BO43837 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
IDH3BO43837 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
IDH3BO43837 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 ABHD17AP5-201ENST00000580133 923 ntBASIC20.46■□□□□ 0.87
IDH3BO43837 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.46■□□□□ 0.87
IDH3BO43837 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IDH3BO43837 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
IDH3BO43837 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.46■□□□□ 0.87
IDH3BO43837 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.45■□□□□ 0.86
IDH3BO43837 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.45■□□□□ 0.86
IDH3BO43837 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IDH3BO43837 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.44■□□□□ 0.86
IDH3BO43837 EP400NL-214ENST00000641289 2402 ntBASIC20.44■□□□□ 0.86
IDH3BO43837 AC131274.2-201ENST00000580697 1507 ntBASIC20.44■□□□□ 0.86
IDH3BO43837 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
IDH3BO43837 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IDH3BO43837 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
IDH3BO43837 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IDH3BO43837 NTF6A-201ENST00000591175 560 ntBASIC20.44■□□□□ 0.86
IDH3BO43837 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IDH3BO43837 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
IDH3BO43837 ALDH1A3-203ENST00000557963 1670 ntBASIC20.44■□□□□ 0.86
IDH3BO43837 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
IDH3BO43837 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IDH3BO43837 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IDH3BO43837 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IDH3BO43837 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
IDH3BO43837 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
IDH3BO43837 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IDH3BO43837 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.43■□□□□ 0.86
IDH3BO43837 AC074183.2-201ENST00000623112 922 ntBASIC20.43■□□□□ 0.86
IDH3BO43837 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IDH3BO43837 DUSP8P3-201ENST00000399571 1760 ntBASIC20.43■□□□□ 0.86
IDH3BO43837 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IDH3BO43837 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IDH3BO43837 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IDH3BO43837 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms