Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSNA1O43805 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SSNA1O43805 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SSNA1O43805 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SSNA1O43805 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SSNA1O43805 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSNA1O43805 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SSNA1O43805 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSNA1O43805 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSNA1O43805 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSNA1O43805 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SSNA1O43805 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SSNA1O43805 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSNA1O43805 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSNA1O43805 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSNA1O43805 AC073130.3-201ENST00000624389 2278 ntBASIC19.13■□□□□ 0.65
SSNA1O43805 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSNA1O43805 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SSNA1O43805 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSNA1O43805 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSNA1O43805 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.13■□□□□ 0.65
SSNA1O43805 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSNA1O43805 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSNA1O43805 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSNA1O43805 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SSNA1O43805 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.12■□□□□ 0.65
SSNA1O43805 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSNA1O43805 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.12■□□□□ 0.65
SSNA1O43805 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.12■□□□□ 0.65
SSNA1O43805 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSNA1O43805 ESRRAP2-201ENST00000418437 1549 ntBASIC19.12■□□□□ 0.65
SSNA1O43805 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.12■□□□□ 0.65
SSNA1O43805 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.12■□□□□ 0.65
SSNA1O43805 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.12■□□□□ 0.65
SSNA1O43805 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.11■□□□□ 0.65
SSNA1O43805 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.11■□□□□ 0.65
SSNA1O43805 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSNA1O43805 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.1■□□□□ 0.65
SSNA1O43805 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SSNA1O43805 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.1■□□□□ 0.65
SSNA1O43805 C11orf96-202ENST00000528572 1834 ntBASIC19.1■□□□□ 0.65
SSNA1O43805 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.1■□□□□ 0.65
SSNA1O43805 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SSNA1O43805 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.1■□□□□ 0.65
SSNA1O43805 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.1■□□□□ 0.65
SSNA1O43805 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.1■□□□□ 0.65
SSNA1O43805 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SSNA1O43805 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSNA1O43805 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.09■□□□□ 0.65
SSNA1O43805 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SSNA1O43805 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSNA1O43805 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSNA1O43805 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.09■□□□□ 0.65
SSNA1O43805 FBXW4P1-201ENST00000426721 2239 ntBASIC19.09■□□□□ 0.65
SSNA1O43805 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.09■□□□□ 0.65
SSNA1O43805 MIR219A2-201ENST00000608502 1504 ntBASIC19.09■□□□□ 0.65
SSNA1O43805 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SSNA1O43805 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSNA1O43805 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSNA1O43805 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSNA1O43805 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SSNA1O43805 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSNA1O43805 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SSNA1O43805 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSNA1O43805 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSNA1O43805 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SSNA1O43805 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSNA1O43805 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSNA1O43805 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSNA1O43805 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSNA1O43805 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SSNA1O43805 SUZ12P1-203ENST00000578195 985 ntBASIC19.08■□□□□ 0.64
SSNA1O43805 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSNA1O43805 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.08■□□□□ 0.64
SSNA1O43805 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SSNA1O43805 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SSNA1O43805 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms