Protein–RNA interactions for Protein: O15126

SCAMP1, Secretory carrier-associated membrane protein 1, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1O15126 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCAMP1O15126 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCAMP1O15126 MIR5787-201ENST00000611784 55 ntBASIC22.23■■□□□ 1.15
SCAMP1O15126 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SCAMP1O15126 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.22■■□□□ 1.15
SCAMP1O15126 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SCAMP1O15126 AC009086.3-201ENST00000623486 1008 ntBASIC22.22■■□□□ 1.15
SCAMP1O15126 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCAMP1O15126 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.21■■□□□ 1.15
SCAMP1O15126 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.21■■□□□ 1.15
SCAMP1O15126 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SCAMP1O15126 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.21■■□□□ 1.15
SCAMP1O15126 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.21■■□□□ 1.15
SCAMP1O15126 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.21■■□□□ 1.15
SCAMP1O15126 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SCAMP1O15126 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCAMP1O15126 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCAMP1O15126 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SCAMP1O15126 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
SCAMP1O15126 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SCAMP1O15126 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCAMP1O15126 AC008764.7-201ENST00000593779 1081 ntBASIC22.2■■□□□ 1.14
SCAMP1O15126 AC092666.2-201ENST00000613287 246 ntBASIC22.2■■□□□ 1.14
SCAMP1O15126 AC136469.2-201ENST00000623944 1028 ntBASIC22.2■■□□□ 1.14
SCAMP1O15126 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCAMP1O15126 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
SCAMP1O15126 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCAMP1O15126 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCAMP1O15126 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCAMP1O15126 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCAMP1O15126 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SCAMP1O15126 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SCAMP1O15126 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SCAMP1O15126 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.19■■□□□ 1.14
SCAMP1O15126 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.19■■□□□ 1.14
SCAMP1O15126 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SCAMP1O15126 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SCAMP1O15126 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.19■■□□□ 1.14
SCAMP1O15126 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.18■■□□□ 1.14
SCAMP1O15126 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SCAMP1O15126 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.18■■□□□ 1.14
SCAMP1O15126 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCAMP1O15126 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SCAMP1O15126 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.18■■□□□ 1.14
SCAMP1O15126 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.18■■□□□ 1.14
SCAMP1O15126 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SCAMP1O15126 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SCAMP1O15126 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCAMP1O15126 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCAMP1O15126 AL139125.2-201ENST00000623134 1869 ntBASIC22.17■■□□□ 1.14
SCAMP1O15126 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SCAMP1O15126 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCAMP1O15126 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCAMP1O15126 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCAMP1O15126 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCAMP1O15126 AC099791.1-201ENST00000416440 715 ntBASIC22.17■■□□□ 1.14
SCAMP1O15126 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.17■■□□□ 1.14
SCAMP1O15126 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
SCAMP1O15126 AC004812.2-201ENST00000611079 2094 ntBASIC22.17■■□□□ 1.14
SCAMP1O15126 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.17■■□□□ 1.14
SCAMP1O15126 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.16■■□□□ 1.14
SCAMP1O15126 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SCAMP1O15126 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SCAMP1O15126 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.16■■□□□ 1.14
SCAMP1O15126 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.16■■□□□ 1.14
SCAMP1O15126 MIR3181-201ENST00000578512 73 ntBASIC22.16■■□□□ 1.14
SCAMP1O15126 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.16■■□□□ 1.14
SCAMP1O15126 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.16■■□□□ 1.14
SCAMP1O15126 MIR6821-201ENST00000617625 74 ntBASIC22.16■■□□□ 1.14
SCAMP1O15126 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 ABCB10P4-201ENST00000566803 2184 ntBASIC22.16■■□□□ 1.14
SCAMP1O15126 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCAMP1O15126 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.16■■□□□ 1.14
SCAMP1O15126 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SCAMP1O15126 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SCAMP1O15126 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SCAMP1O15126 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.15■■□□□ 1.14
SCAMP1O15126 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.15■■□□□ 1.14
SCAMP1O15126 pRNA.6-201ENST00000610482 90 ntBASIC22.15■■□□□ 1.14
SCAMP1O15126 pRNA.5-201ENST00000612139 90 ntBASIC22.15■■□□□ 1.14
SCAMP1O15126 pRNA.11-201ENST00000618423 90 ntBASIC22.15■■□□□ 1.14
SCAMP1O15126 pRNA.13-201ENST00000619112 90 ntBASIC22.15■■□□□ 1.14
SCAMP1O15126 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCAMP1O15126 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCAMP1O15126 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCAMP1O15126 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms