Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDX4O14627 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CDX4O14627 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDX4O14627 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.02■■□□□ 1.12
CDX4O14627 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.02■■□□□ 1.12
CDX4O14627 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.02■■□□□ 1.12
CDX4O14627 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.02■■□□□ 1.12
CDX4O14627 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CDX4O14627 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CDX4O14627 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDX4O14627 AC133637.1-201ENST00000624115 1537 ntBASIC22.01■■□□□ 1.11
CDX4O14627 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDX4O14627 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.01■■□□□ 1.11
CDX4O14627 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.01■■□□□ 1.11
CDX4O14627 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.01■■□□□ 1.11
CDX4O14627 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.01■■□□□ 1.11
CDX4O14627 KRT18P61-201ENST00000585825 1298 ntBASIC22.01■■□□□ 1.11
CDX4O14627 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.01■■□□□ 1.11
CDX4O14627 AC073111.5-205ENST00000641717 521 ntBASIC22.01■■□□□ 1.11
CDX4O14627 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.01■■□□□ 1.11
CDX4O14627 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.01■■□□□ 1.11
CDX4O14627 ESRRAP2-201ENST00000418437 1549 ntBASIC22.01■■□□□ 1.11
CDX4O14627 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDX4O14627 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDX4O14627 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22■■□□□ 1.11
CDX4O14627 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CDX4O14627 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDX4O14627 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CDX4O14627 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22■■□□□ 1.11
CDX4O14627 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22■■□□□ 1.11
CDX4O14627 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CDX4O14627 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
CDX4O14627 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDX4O14627 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDX4O14627 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.99■■□□□ 1.11
CDX4O14627 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.99■■□□□ 1.11
CDX4O14627 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.99■■□□□ 1.11
CDX4O14627 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDX4O14627 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.99■■□□□ 1.11
CDX4O14627 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.99■■□□□ 1.11
CDX4O14627 AC010525.1-201ENST00000585559 441 ntBASIC21.99■■□□□ 1.11
CDX4O14627 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.99■■□□□ 1.11
CDX4O14627 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDX4O14627 AC091060.1-201ENST00000623524 1766 ntBASIC21.99■■□□□ 1.11
CDX4O14627 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.99■■□□□ 1.11
CDX4O14627 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDX4O14627 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.98■■□□□ 1.11
CDX4O14627 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CDX4O14627 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDX4O14627 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CDX4O14627 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDX4O14627 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDX4O14627 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDX4O14627 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.98■■□□□ 1.11
CDX4O14627 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDX4O14627 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CDX4O14627 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.98■■□□□ 1.11
CDX4O14627 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.98■■□□□ 1.11
CDX4O14627 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.98■■□□□ 1.11
CDX4O14627 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.98■■□□□ 1.11
CDX4O14627 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDX4O14627 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDX4O14627 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.97■■□□□ 1.11
CDX4O14627 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDX4O14627 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.97■■□□□ 1.11
CDX4O14627 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDX4O14627 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.97■■□□□ 1.11
CDX4O14627 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDX4O14627 AC104771.1-201ENST00000603335 964 ntBASIC21.97■■□□□ 1.11
CDX4O14627 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDX4O14627 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDX4O14627 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX4O14627 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX4O14627 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDX4O14627 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.96■■□□□ 1.11
CDX4O14627 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.96■■□□□ 1.11
CDX4O14627 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.96■■□□□ 1.11
CDX4O14627 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.96■■□□□ 1.11
CDX4O14627 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDX4O14627 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.96■■□□□ 1.11
CDX4O14627 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.95■■□□□ 1.1
CDX4O14627 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.95■■□□□ 1.1
CDX4O14627 AC016769.1-201ENST00000409132 1010 ntBASIC21.95■■□□□ 1.1
CDX4O14627 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.95■■□□□ 1.1
CDX4O14627 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.95■■□□□ 1.1
CDX4O14627 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.95■■□□□ 1.1
CDX4O14627 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.95■■□□□ 1.1
CDX4O14627 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.95■■□□□ 1.1
CDX4O14627 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CDX4O14627 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX4O14627 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.95■■□□□ 1.1
CDX4O14627 AC092803.2-201ENST00000564287 1899 ntBASIC21.94■■□□□ 1.1
CDX4O14627 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms