Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM9A6NGZ8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM9A6NGZ8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.25■□□□□ 0.19
SMIM9A6NGZ8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
SMIM9A6NGZ8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM9A6NGZ8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 ABCB10P4-201ENST00000566803 2184 ntBASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM9A6NGZ8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 MIR4466-201ENST00000606121 54 ntBASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM9A6NGZ8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 AC144652.1-201ENST00000609974 1624 ntBASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM9A6NGZ8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
SMIM9A6NGZ8 AC093323.1-202ENST00000635031 2045 ntBASIC16.21■□□□□ 0.18
SMIM9A6NGZ8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM9A6NGZ8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 LINC01529-204ENST00000636474 1715 ntBASIC16.19■□□□□ 0.18
SMIM9A6NGZ8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM9A6NGZ8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMIM9A6NGZ8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms