Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC33.62■■■□□ 2.97
HFM1A2PYH4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC33.62■■■□□ 2.97
HFM1A2PYH4 AC136469.2-201ENST00000623944 1028 ntBASIC33.62■■■□□ 2.97
HFM1A2PYH4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
HFM1A2PYH4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HFM1A2PYH4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HFM1A2PYH4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HFM1A2PYH4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HFM1A2PYH4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC33.62■■■□□ 2.97
HFM1A2PYH4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC33.62■■■□□ 2.97
HFM1A2PYH4 PBX2P1-201ENST00000493219 1291 ntBASIC33.62■■■□□ 2.97
HFM1A2PYH4 SUDS3P1-201ENST00000505831 966 ntBASIC33.62■■■□□ 2.97
HFM1A2PYH4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC33.62■■■□□ 2.97
HFM1A2PYH4 MIR4767-201ENST00000582827 78 ntBASIC33.62■■■□□ 2.97
HFM1A2PYH4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC33.61■■■□□ 2.97
HFM1A2PYH4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC33.61■■■□□ 2.97
HFM1A2PYH4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC33.61■■■□□ 2.97
HFM1A2PYH4 AP001330.3-201ENST00000520123 633 ntBASIC33.61■■■□□ 2.97
HFM1A2PYH4 MIR3181-201ENST00000578512 73 ntBASIC33.61■■■□□ 2.97
HFM1A2PYH4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC33.61■■■□□ 2.97
HFM1A2PYH4 AC144652.1-201ENST00000609974 1624 ntBASIC33.61■■■□□ 2.97
HFM1A2PYH4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
HFM1A2PYH4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC33.6■■■□□ 2.97
HFM1A2PYH4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC33.6■■■□□ 2.97
HFM1A2PYH4 EDA-201ENST00000338901 1233 ntBASIC33.6■■■□□ 2.97
HFM1A2PYH4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC33.6■■■□□ 2.97
HFM1A2PYH4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC33.6■■■□□ 2.97
HFM1A2PYH4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
HFM1A2PYH4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
HFM1A2PYH4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
HFM1A2PYH4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
HFM1A2PYH4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC33.59■■■□□ 2.97
HFM1A2PYH4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
HFM1A2PYH4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
HFM1A2PYH4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC33.58■■■□□ 2.97
HFM1A2PYH4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
HFM1A2PYH4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
HFM1A2PYH4 H19-210ENST00000439725 1929 ntTSL 2 BASIC33.58■■■□□ 2.97
HFM1A2PYH4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
HFM1A2PYH4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
HFM1A2PYH4 AC005837.3-201ENST00000612163 286 ntBASIC33.57■■■□□ 2.96
HFM1A2PYH4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
HFM1A2PYH4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
HFM1A2PYH4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
HFM1A2PYH4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
HFM1A2PYH4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC33.57■■■□□ 2.96
HFM1A2PYH4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
HFM1A2PYH4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
HFM1A2PYH4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC33.56■■■□□ 2.96
HFM1A2PYH4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
HFM1A2PYH4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC33.56■■■□□ 2.96
HFM1A2PYH4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
HFM1A2PYH4 AC079630.1-202ENST00000618127 1840 ntBASIC33.55■■■□□ 2.96
HFM1A2PYH4 MIR939-201ENST00000401314 82 ntBASIC33.55■■■□□ 2.96
HFM1A2PYH4 DUX4L4-201ENST00000566884 1269 ntBASIC33.55■■■□□ 2.96
HFM1A2PYH4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC33.55■■■□□ 2.96
HFM1A2PYH4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
HFM1A2PYH4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
HFM1A2PYH4 AL499627.2-201ENST00000606283 725 ntBASIC33.54■■■□□ 2.96
HFM1A2PYH4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC33.54■■■□□ 2.96
HFM1A2PYH4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
HFM1A2PYH4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC33.54■■■□□ 2.96
HFM1A2PYH4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
HFM1A2PYH4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC33.54■■■□□ 2.96
HFM1A2PYH4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC33.54■■■□□ 2.96
HFM1A2PYH4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC33.53■■■□□ 2.96
HFM1A2PYH4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC33.53■■■□□ 2.96
HFM1A2PYH4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
HFM1A2PYH4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
HFM1A2PYH4 FP325331.1-202ENST00000623531 1380 ntBASIC33.53■■■□□ 2.96
HFM1A2PYH4 HES6-206ENST00000409574 738 ntTSL 2 BASIC33.53■■■□□ 2.96
HFM1A2PYH4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC33.53■■■□□ 2.96
HFM1A2PYH4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
HFM1A2PYH4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC33.53■■■□□ 2.96
HFM1A2PYH4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
HFM1A2PYH4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC33.52■■■□□ 2.96
HFM1A2PYH4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC33.52■■■□□ 2.96
HFM1A2PYH4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC33.52■■■□□ 2.96
HFM1A2PYH4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
HFM1A2PYH4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
HFM1A2PYH4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC33.51■■■□□ 2.96
HFM1A2PYH4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC33.51■■■□□ 2.96
HFM1A2PYH4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
HFM1A2PYH4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC33.51■■■□□ 2.96
HFM1A2PYH4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC33.51■■■□□ 2.95
HFM1A2PYH4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC33.51■■■□□ 2.95
HFM1A2PYH4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC33.51■■■□□ 2.95
HFM1A2PYH4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
HFM1A2PYH4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
HFM1A2PYH4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC33.51■■■□□ 2.95
HFM1A2PYH4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
HFM1A2PYH4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
HFM1A2PYH4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
HFM1A2PYH4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
HFM1A2PYH4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC33.5■■■□□ 2.95
HFM1A2PYH4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
HFM1A2PYH4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
HFM1A2PYH4 AF213884.3-201ENST00000563833 479 ntBASIC33.5■■■□□ 2.95
HFM1A2PYH4 pRNA.6-201ENST00000610482 90 ntBASIC33.5■■■□□ 2.95
HFM1A2PYH4 pRNA.5-201ENST00000612139 90 ntBASIC33.5■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms