Protein–RNA interactions for Protein: A0AV96

RBM47, RNA-binding protein 47, humanhuman

Known RBP Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47A0AV96 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RBM47A0AV96 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
RBM47A0AV96 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RBM47A0AV96 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RBM47A0AV96 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RBM47A0AV96 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RBM47A0AV96 AC142381.3-201ENST00000568208 1670 ntBASIC25.31■■□□□ 1.64
RBM47A0AV96 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RBM47A0AV96 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RBM47A0AV96 AC133637.1-201ENST00000624115 1537 ntBASIC25.31■■□□□ 1.64
RBM47A0AV96 TSPY26P-201ENST00000476365 1326 ntBASIC25.31■■□□□ 1.64
RBM47A0AV96 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RBM47A0AV96 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RBM47A0AV96 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.3■■□□□ 1.64
RBM47A0AV96 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.3■■□□□ 1.64
RBM47A0AV96 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RBM47A0AV96 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RBM47A0AV96 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RBM47A0AV96 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.3■■□□□ 1.64
RBM47A0AV96 DUX4L4-201ENST00000566884 1269 ntBASIC25.3■■□□□ 1.64
RBM47A0AV96 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RBM47A0AV96 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RBM47A0AV96 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
RBM47A0AV96 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.3■■□□□ 1.64
RBM47A0AV96 AC138932.3-201ENST00000567634 1902 ntBASIC25.29■■□□□ 1.64
RBM47A0AV96 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RBM47A0AV96 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
RBM47A0AV96 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RBM47A0AV96 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RBM47A0AV96 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.29■■□□□ 1.64
RBM47A0AV96 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.29■■□□□ 1.64
RBM47A0AV96 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
RBM47A0AV96 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RBM47A0AV96 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.28■■□□□ 1.64
RBM47A0AV96 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RBM47A0AV96 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RBM47A0AV96 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
RBM47A0AV96 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
RBM47A0AV96 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
RBM47A0AV96 IGHV3-19-201ENST00000521488 291 ntBASIC25.28■■□□□ 1.64
RBM47A0AV96 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RBM47A0AV96 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.28■■□□□ 1.64
RBM47A0AV96 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.28■■□□□ 1.64
RBM47A0AV96 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.28■■□□□ 1.64
RBM47A0AV96 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RBM47A0AV96 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RBM47A0AV96 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
RBM47A0AV96 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RBM47A0AV96 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RBM47A0AV96 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
RBM47A0AV96 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RBM47A0AV96 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
RBM47A0AV96 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.27■■□□□ 1.64
RBM47A0AV96 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.27■■□□□ 1.64
RBM47A0AV96 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RBM47A0AV96 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RBM47A0AV96 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.26■■□□□ 1.63
RBM47A0AV96 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RBM47A0AV96 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.26■■□□□ 1.63
RBM47A0AV96 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.26■■□□□ 1.63
RBM47A0AV96 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RBM47A0AV96 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
RBM47A0AV96 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RBM47A0AV96 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RBM47A0AV96 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RBM47A0AV96 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
RBM47A0AV96 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
RBM47A0AV96 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RBM47A0AV96 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.25■■□□□ 1.63
RBM47A0AV96 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.25■■□□□ 1.63
RBM47A0AV96 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RBM47A0AV96 YBX1P1-201ENST00000445822 960 ntBASIC25.25■■□□□ 1.63
RBM47A0AV96 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.25■■□□□ 1.63
RBM47A0AV96 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.25■■□□□ 1.63
RBM47A0AV96 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.25■■□□□ 1.63
RBM47A0AV96 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
RBM47A0AV96 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RBM47A0AV96 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RBM47A0AV96 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.25■■□□□ 1.63
RBM47A0AV96 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RBM47A0AV96 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RBM47A0AV96 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.25■■□□□ 1.63
RBM47A0AV96 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RBM47A0AV96 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RBM47A0AV96 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RBM47A0AV96 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RBM47A0AV96 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RBM47A0AV96 MIR572-201ENST00000384983 95 ntBASIC25.24■■□□□ 1.63
RBM47A0AV96 AC034268.1-201ENST00000441047 882 ntBASIC25.24■■□□□ 1.63
RBM47A0AV96 OR2I1P-207ENST00000453522 948 ntBASIC25.24■■□□□ 1.63
RBM47A0AV96 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RBM47A0AV96 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.24■■□□□ 1.63
RBM47A0AV96 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.24■■□□□ 1.63
RBM47A0AV96 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
RBM47A0AV96 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.23■■□□□ 1.63
RBM47A0AV96 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RBM47A0AV96 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RBM47A0AV96 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RBM47A0AV96 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RBM47A0AV96 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms