Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DUXBA0A1W2PPF3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 AC092053.2-201ENST00000640557 1818 ntBASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUXBA0A1W2PPF3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUXBA0A1W2PPF3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
DUXBA0A1W2PPF3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
DUXBA0A1W2PPF3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 AC131274.2-201ENST00000580697 1507 ntBASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUXBA0A1W2PPF3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
DUXBA0A1W2PPF3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 AC009831.1-201ENST00000580420 1582 ntBASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 MIR639-201ENST00000384974 98 ntBASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 AC087393.1-201ENST00000582896 145 ntBASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 AC018755.3-202ENST00000596210 929 ntBASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 AC011551.1-201ENST00000614101 683 ntBASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUXBA0A1W2PPF3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 C11orf96-202ENST00000528572 1834 ntBASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DUXBA0A1W2PPF3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms